Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU472085 |
| length | 943 |
| lncRNA type | antisense_over |
| GC content | 0.47 |
| exon number | 2 |
| gene id | G416481 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 54887511 ~ 54888514 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU472021 | lncRNA | downstream | 10819 | 54876456 ~ 54876692 (-) | True | G416432 |
| TU472016 | lncRNA | downstream | 11173 | 54874002 ~ 54876338 (-) | True | G416427 |
| TU472017 | lncRNA | downstream | 17325 | 54869668 ~ 54870186 (-) | True | G416428 |
| TU472008 | lncRNA | downstream | 36829 | 54850233 ~ 54850682 (-) | True | G416419 |
| TU472006 | lncRNA | downstream | 37523 | 54847358 ~ 54849988 (-) | True | G416418 |
| TU472130 | lncRNA | upstream | 48762 | 54937276 ~ 54938242 (-) | True | G416521 |
| TU472139 | lncRNA | upstream | 62993 | 54951507 ~ 54952438 (-) | True | G416530 |
| TU472160 | lncRNA | upstream | 74540 | 54963054 ~ 54963291 (-) | True | G416544 |
| TU472161 | lncRNA | upstream | 74976 | 54963490 ~ 54963703 (-) | True | G416545 |
| TU472300 | lncRNA | upstream | 91919 | 54980433 ~ 54981243 (-) | True | G416673 |
| XM_021603365.2 | mRNA | downstream | 117225 | 54717326 ~ 54770286 (-) | False | slc44a5b |
| XM_036977856.1 | mRNA | downstream | 117225 | 54717326 ~ 54770286 (-) | False | slc44a5b |
| XM_036977855.1 | mRNA | downstream | 117225 | 54719507 ~ 54770286 (-) | True | slc44a5b |
| XM_021603366.2 | mRNA | downstream | 117226 | 54719507 ~ 54770285 (-) | False | slc44a5b |
| XM_021603359.2 | mRNA | downstream | 225657 | 54640281 ~ 54661854 (-) | True | erich3 |
| XM_021603376.2 | mRNA | upstream | 10582 | 54899096 ~ 54924751 (-) | False | LOC110524065 |
| XM_036977860.1 | mRNA | upstream | 10582 | 54899096 ~ 54924752 (-) | True | LOC110524065 |
| XR_005051585.1 | mRNA | upstream | 109172 | 54997686 ~ 55005447 (-) | True | LOC118964528 |
| XM_021603380.2 | mRNA | upstream | 163210 | 55051724 ~ 55071938 (-) | True | LOC110524068 |
| XM_021603381.2 | mRNA | upstream | 183571 | 55072085 ~ 55073951 (-) | False | LOC110524069 |
| TU471641 | other | downstream | 501283 | 54363286 ~ 54386228 (-) | False | G416110 |
| TU470869 | other | downstream | 881838 | 54003731 ~ 54005673 (-) | True | G415464 |
| TU470822 | other | downstream | 994605 | 53890760 ~ 53892906 (-) | True | G415420 |
| TU470639 | other | downstream | 1268647 | 53617738 ~ 53618864 (-) | True | G415256 |
| TU470637 | other | downstream | 1268752 | 53617683 ~ 53618759 (-) | False | G415256 |
| TU472396 | other | upstream | 252801 | 55141315 ~ 55160267 (-) | True | LOC110524071 |
| TU473281 | other | upstream | 720321 | 55608835 ~ 55609730 (-) | True | G417527 |
| TU474559 | other | upstream | 1820284 | 56708798 ~ 56709840 (-) | False | LOC110522975 |
| TU474560 | other | upstream | 1821766 | 56710280 ~ 56711384 (-) | True | LOC110522975 |
| TU474707 | other | upstream | 1945512 | 56834026 ~ 56834595 (-) | True | G418830 |
