Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU472130 |
| length | 967 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 1 |
| gene id | G416521 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 54937276 ~ 54938242 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU472085 | lncRNA | downstream | 48762 | 54887511 ~ 54888514 (-) | False | G416481 |
| TU472082 | lncRNA | downstream | 48762 | 54887546 ~ 54888514 (-) | False | G416481 |
| TU472083 | lncRNA | downstream | 48762 | 54887546 ~ 54888514 (-) | True | G416481 |
| TU472021 | lncRNA | downstream | 60584 | 54876456 ~ 54876692 (-) | True | G416432 |
| TU472016 | lncRNA | downstream | 60938 | 54874002 ~ 54876338 (-) | True | G416427 |
| TU472139 | lncRNA | upstream | 13265 | 54951507 ~ 54952438 (-) | True | G416530 |
| TU472160 | lncRNA | upstream | 24812 | 54963054 ~ 54963291 (-) | True | G416544 |
| TU472161 | lncRNA | upstream | 25248 | 54963490 ~ 54963703 (-) | True | G416545 |
| TU472300 | lncRNA | upstream | 42191 | 54980433 ~ 54981243 (-) | True | G416673 |
| TU472323 | lncRNA | upstream | 80113 | 55018355 ~ 55018559 (-) | True | G416696 |
| XM_036977860.1 | mRNA | downstream | 12524 | 54899096 ~ 54924752 (-) | True | LOC110524065 |
| XM_021603376.2 | mRNA | downstream | 12525 | 54899096 ~ 54924751 (-) | False | LOC110524065 |
| XM_021603365.2 | mRNA | downstream | 166990 | 54717326 ~ 54770286 (-) | False | slc44a5b |
| XM_036977856.1 | mRNA | downstream | 166990 | 54717326 ~ 54770286 (-) | False | slc44a5b |
| XM_036977855.1 | mRNA | downstream | 166990 | 54719507 ~ 54770286 (-) | True | slc44a5b |
| XR_005051585.1 | mRNA | upstream | 59444 | 54997686 ~ 55005447 (-) | True | LOC118964528 |
| XM_021603380.2 | mRNA | upstream | 113482 | 55051724 ~ 55071938 (-) | True | LOC110524068 |
| XM_021603381.2 | mRNA | upstream | 133843 | 55072085 ~ 55073951 (-) | False | LOC110524069 |
| XM_036977864.1 | mRNA | upstream | 164717 | 55102959 ~ 55122187 (-) | False | si:ch211-221n20.8 |
| XM_036977866.1 | mRNA | upstream | 164717 | 55102959 ~ 55122188 (-) | False | si:ch211-221n20.8 |
| TU471641 | other | downstream | 551048 | 54363286 ~ 54386228 (-) | False | G416110 |
| TU470869 | other | downstream | 931603 | 54003731 ~ 54005673 (-) | True | G415464 |
| TU470822 | other | downstream | 1044370 | 53890760 ~ 53892906 (-) | True | G415420 |
| TU470639 | other | downstream | 1318412 | 53617738 ~ 53618864 (-) | True | G415256 |
| TU470637 | other | downstream | 1318517 | 53617683 ~ 53618759 (-) | False | G415256 |
| TU472396 | other | upstream | 203073 | 55141315 ~ 55160267 (-) | True | LOC110524071 |
| TU473281 | other | upstream | 670593 | 55608835 ~ 55609730 (-) | True | G417527 |
| TU474559 | other | upstream | 1770556 | 56708798 ~ 56709840 (-) | False | LOC110522975 |
| TU474560 | other | upstream | 1772038 | 56710280 ~ 56711384 (-) | True | LOC110522975 |
| TU474707 | other | upstream | 1895784 | 56834026 ~ 56834595 (-) | True | G418830 |
