Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU472206 |
| length | 213 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 1 |
| gene id | G416589 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 55021314 ~ 55021526 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU472176 | lncRNA | upstream | 3120 | 54974659 ~ 55018194 (+) | True | G416560 |
| TU472138 | lncRNA | upstream | 69249 | 54951854 ~ 54952065 (+) | True | G416529 |
| TU472041 | lncRNA | upstream | 126967 | 54894133 ~ 54894347 (+) | True | G416441 |
| TU472038 | lncRNA | upstream | 131742 | 54889300 ~ 54889572 (+) | True | G416438 |
| TU471976 | lncRNA | upstream | 152777 | 54868248 ~ 54868537 (+) | True | LOC110524063 |
| TU472242 | lncRNA | downstream | 50559 | 55072085 ~ 55073748 (+) | True | G416616 |
| TU472428 | lncRNA | downstream | 157032 | 55178558 ~ 55178825 (+) | True | G416789 |
| TU472429 | lncRNA | downstream | 157411 | 55178937 ~ 55179196 (+) | True | G416790 |
| TU472445 | lncRNA | downstream | 158966 | 55180492 ~ 55182626 (+) | True | G416791 |
| TU472478 | lncRNA | downstream | 196228 | 55217754 ~ 55218712 (+) | True | G416821 |
| XM_021601325.2 | mRNA | upstream | 64024 | 54955247 ~ 54957290 (+) | True | LOC110522873 |
| XM_021603378.2 | mRNA | upstream | 86120 | 54926333 ~ 54935194 (+) | True | LOC110524066 |
| XM_036977858.1 | mRNA | upstream | 132791 | 54876863 ~ 54888523 (+) | True | LOC110522972 |
| XM_036977859.1 | mRNA | upstream | 135348 | 54876863 ~ 54885966 (+) | False | LOC110522972 |
| XM_021603371.2 | mRNA | upstream | 144974 | 54870037 ~ 54876340 (+) | False | LOC110524063 |
| XM_021603379.2 | mRNA | downstream | 10676 | 55032202 ~ 55041553 (+) | False | LOC110524067 |
| XM_036977861.1 | mRNA | downstream | 10676 | 55032202 ~ 55041553 (+) | True | LOC110524067 |
| XM_036977863.1 | mRNA | downstream | 61373 | 55082899 ~ 55097257 (+) | True | LOC118964621 |
| XM_021603387.2 | mRNA | downstream | 216341 | 55237867 ~ 55239661 (+) | True | LOC110524073 |
| XM_021603388.2 | mRNA | downstream | 228351 | 55249877 ~ 55255113 (+) | False | LOC110524074 |
| TU471439 | other | upstream | 408172 | 54590074 ~ 54613142 (+) | False | G415946 |
| TU471449 | other | upstream | 408172 | 54590074 ~ 54613142 (+) | False | G415946 |
| TU471274 | other | upstream | 670699 | 54346536 ~ 54350615 (+) | False | mutyh |
| TU471261 | other | upstream | 690834 | 54330080 ~ 54330480 (+) | True | G415809 |
| TU471260 | other | upstream | 691534 | 54329195 ~ 54329780 (+) | True | G415808 |
| TU472519 | other | downstream | 303119 | 55324645 ~ 55325271 (+) | True | G416857 |
| TU473866 | other | downstream | 1596364 | 56617890 ~ 56628617 (+) | True | G418077 |
| TU473915 | other | downstream | 1704659 | 56726185 ~ 56729821 (+) | True | G418119 |
| TU474058 | other | downstream | 1902398 | 56923924 ~ 56925176 (+) | True | G418251 |
| TU474030 | other | downstream | 1922312 | 56943838 ~ 56958165 (+) | True | LOC100135807 |
