Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU472242 |
| length | 392 |
| lncRNA type | antisense_over |
| GC content | 0.48 |
| exon number | 4 |
| gene id | G416616 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 55072085 ~ 55073748 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU472206 | lncRNA | upstream | 50559 | 55021314 ~ 55021526 (+) | True | G416589 |
| TU472176 | lncRNA | upstream | 53891 | 54974659 ~ 55018194 (+) | True | G416560 |
| TU472138 | lncRNA | upstream | 120020 | 54951854 ~ 54952065 (+) | True | G416529 |
| TU472041 | lncRNA | upstream | 177738 | 54894133 ~ 54894347 (+) | True | G416441 |
| TU472038 | lncRNA | upstream | 182513 | 54889300 ~ 54889572 (+) | True | G416438 |
| TU472428 | lncRNA | downstream | 104810 | 55178558 ~ 55178825 (+) | True | G416789 |
| TU472429 | lncRNA | downstream | 105189 | 55178937 ~ 55179196 (+) | True | G416790 |
| TU472445 | lncRNA | downstream | 106744 | 55180492 ~ 55182626 (+) | True | G416791 |
| TU472478 | lncRNA | downstream | 144006 | 55217754 ~ 55218712 (+) | True | G416821 |
| TU472500 | lncRNA | downstream | 168750 | 55242498 ~ 55255101 (+) | True | LOC110524074 |
| XM_021603379.2 | mRNA | upstream | 30532 | 55032202 ~ 55041553 (+) | False | LOC110524067 |
| XM_036977861.1 | mRNA | upstream | 30532 | 55032202 ~ 55041553 (+) | True | LOC110524067 |
| XM_021601325.2 | mRNA | upstream | 114795 | 54955247 ~ 54957290 (+) | True | LOC110522873 |
| XM_021603378.2 | mRNA | upstream | 136891 | 54926333 ~ 54935194 (+) | True | LOC110524066 |
| XM_036977858.1 | mRNA | upstream | 183562 | 54876863 ~ 54888523 (+) | True | LOC110522972 |
| XM_036977863.1 | mRNA | downstream | 9151 | 55082899 ~ 55097257 (+) | True | LOC118964621 |
| XM_021603387.2 | mRNA | downstream | 164119 | 55237867 ~ 55239661 (+) | True | LOC110524073 |
| XM_021603388.2 | mRNA | downstream | 176129 | 55249877 ~ 55255113 (+) | False | LOC110524074 |
| XM_036977879.1 | mRNA | downstream | 183926 | 55257674 ~ 55268360 (+) | False | LOC110524076 |
| XM_021603389.2 | mRNA | downstream | 184771 | 55258519 ~ 55268360 (+) | False | LOC110524076 |
| TU471439 | other | upstream | 458943 | 54590074 ~ 54613142 (+) | False | G415946 |
| TU471449 | other | upstream | 458943 | 54590074 ~ 54613142 (+) | False | G415946 |
| TU471274 | other | upstream | 721470 | 54346536 ~ 54350615 (+) | False | mutyh |
| TU471261 | other | upstream | 741605 | 54330080 ~ 54330480 (+) | True | G415809 |
| TU471260 | other | upstream | 742305 | 54329195 ~ 54329780 (+) | True | G415808 |
| TU472519 | other | downstream | 250897 | 55324645 ~ 55325271 (+) | True | G416857 |
| TU473866 | other | downstream | 1544142 | 56617890 ~ 56628617 (+) | True | G418077 |
| TU473915 | other | downstream | 1652437 | 56726185 ~ 56729821 (+) | True | G418119 |
| TU474058 | other | downstream | 1850176 | 56923924 ~ 56925176 (+) | True | G418251 |
| TU474030 | other | downstream | 1870090 | 56943838 ~ 56958165 (+) | True | LOC100135807 |
