RNA id: TCONS_00031589



Basic Information


Item Value
RNA id TCONS_00031589
length 1209
RNA type nonsense_mediated_decay
GC content 0.49
exon number 9
gene id XLOC_015923
representative False

Chromosome Information


Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 50862527 ~ 50899928 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


CTTCACTGCACCAGGAACTTCATCCACATGAACCTGTTTGTGTCCTTCATCCTGAGGGCCATTTCTGTCTTTATTAAAGATGGAGTTCTGTATGCAGAGGAGGACAGTGACCACTGCTTCGTTCACACTGTGGGCTGTAAAGCGGTGATGGTGTTTTTCCACTACTGCGTGATGTCAAACTACTTCTGGCTCTTCATCGAAGGTCTTTATCTATTTACTCTTCTGGTCGAAACCTTCTTTCCAGAGAGACGCTACTTCTACTGGTACACCATCATCGGCTGGGGAACGCCCACCATTTGTGTGACCATATGGGCCGTTCTGCGCCTTCATTTTGATGATTCTGGCTGCTGGGACATGAATGATAACACTGCCCTCTGGTGGGTGATCAAAGGCCCTGTGGTGGCATCAATCATGATTAACTTTGTGCTGTTCATTGGGATCATCATAATCCTGGTGCAGAAGCTTCAGTCTCCAGACATCGGCGGAAACGAGTCCAGCATttatctCTTGCTTGCTTCACAGGACTTAAATCCGAGGGCTTTGTACACCGTACAATGTAAGCttctgagcaaactgaccacaccagaAAAGTTGACCATGTGGAGATAGATAGaCGTCTGGCGCGCTCCACCCTTCTCCTCATTCCTCTGTTTGGGATCCACTACACTGTGTTTGCCTTTTCCCCGGAGGATTTCAGCAAGCGGGAGCGACTGGTCTTTGAGCTCGGCCTGGGCTCCTTCCAGGGGTTTGTTGTGGCTGTGCTGTACTGCTTTCTGAATGGAGAGGTGCAGTCGGAGATAAAGAGGAAATGGAGGAGTTGGACGGTGAACAGGTACTTTGCTGTGGACCTGAAGCAGCAGCGTCACCCTTCGCTAGCGAGCAGTGGGGTGAACGGGGGGACGCAGCTGTCCATCCTCAGCAAGAGCAGCTCTCAGATACGCATGTCCAGCCCTCTGGCCGAGACAGTCAACCTCAACCTGCCAACCTGAGCGCCTGATCGGCCCAATCCCCCCTAAAGCCCCGCCCTTCAACTCACTCTCTTCACCTGCAGTAGGGACGACCAATCACAATTAGACTATGAAATATTCATGAAATCCCTGGATATTACTTCACGAGATCAaaattgagtttattttgttagctcacattgttattctttaggtgaacgattaatctgtgcaagttaattttctgaattttaaaaaaaaa

Function


GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0007188 adenylate cyclase-modulating G protein-coupled receptor signaling pathway biological_process
GO:0007200 phospholipase C-activating G protein-coupled receptor signaling pathway biological_process
GO:0007165 signal transduction biological_process
GO:0007166 cell surface receptor signaling pathway biological_process
GO:0043005 neuron projection cellular_component
GO:0005886 plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0017046 peptide hormone binding molecular_function
GO:0008528 G protein-coupled peptide receptor activity molecular_function
GO:0004888 transmembrane signaling receptor activity molecular_function
GO:0004930 G protein-coupled receptor activity molecular_function
GO:0004999 vasoactive intestinal polypeptide receptor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050315-1 Predicted to enable G protein-coupled peptide receptor activity and peptide hormone binding activity. Acts upstream of or within adenylate cyclase-modulating G protein-coupled receptor signaling pathway and phospholipase C-activating G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in neuron projection and plasma membrane. Is expressed in several structures, including central nervous system; eye; gut; heart; and pleuroperitoneal region. Orthologous to human ADCYAP1R1 (ADCYAP receptor type I).

Ensembl:

ensembl_id ENSDART00000159195

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00033317 lncRNA upstream 170181 50691884 ~ 50692346 (+) True XLOC_015921
TCONS_00033316 lncRNA upstream 233372 50608064 ~ 50629155 (+) False XLOC_015920
TCONS_00033684 lncRNA upstream 583286 50274078 ~ 50279241 (+) False XLOC_015916
TCONS_00033685 lncRNA upstream 583286 50274109 ~ 50279241 (+) True XLOC_015916
TCONS_00031574 lncRNA upstream 997499 49860954 ~ 49865028 (+) False XLOC_015913
TCONS_00033686 lncRNA downstream 6866 50898810 ~ 50899927 (+) True XLOC_015923
TCONS_00031597 lncRNA downstream 107764 50999708 ~ 51028786 (+) False XLOC_015925
TCONS_00031602 lncRNA downstream 179755 51071699 ~ 51079083 (+) True XLOC_015926
TCONS_00033318 lncRNA downstream 506611 51398555 ~ 51407126 (+) True XLOC_015928
TCONS_00033687 lncRNA downstream 585713 51477657 ~ 51593578 (+) True XLOC_015929
TCONS_00031586 mRNA upstream 97445 50722439 ~ 50765082 (+) False XLOC_015922
TCONS_00031587 mRNA upstream 106408 50738325 ~ 50756119 (+) True XLOC_015922
TCONS_00031584 mRNA upstream 233372 50608099 ~ 50629155 (+) False XLOC_015920
TCONS_00031583 mRNA upstream 233372 50608099 ~ 50629155 (+) False XLOC_015920
TCONS_00031585 mRNA upstream 233372 50626476 ~ 50629155 (+) True XLOC_015920
TCONS_00031592 mRNA downstream 76003 50967947 ~ 50973896 (+) True XLOC_015924
TCONS_00031593 mRNA downstream 107533 50999477 ~ 51032888 (+) False XLOC_015925
TCONS_00031594 mRNA downstream 107731 50999675 ~ 51031260 (+) False XLOC_015925
TCONS_00031595 mRNA downstream 107757 50999701 ~ 51028889 (+) False XLOC_015925
TCONS_00031596 mRNA downstream 107762 50999706 ~ 51028267 (+) False XLOC_015925
TCONS_00031582 other upstream 272079 50590332 ~ 50590448 (+) True XLOC_015919
TCONS_00031579 other upstream 659232 50202638 ~ 50203295 (+) True XLOC_015915
TCONS_00031572 other upstream 1005734 49855746 ~ 49856793 (+) True XLOC_015912
TCONS_00031564 other upstream 1214538 49646958 ~ 49647989 (+) True XLOC_015908
TCONS_00031539 other upstream 2597925 48263750 ~ 48264602 (+) True XLOC_015891
TCONS_00031613 other downstream 1230776 52122720 ~ 52139696 (+) True XLOC_015939
TCONS_00031622 other downstream 2794127 53686071 ~ 53686188 (+) True XLOC_015951
TCONS_00031635 other downstream 3863228 54755172 ~ 54786740 (+) False XLOC_015963
TCONS_00031662 other downstream 5248028 56139972 ~ 56162604 (+) True XLOC_015979
TCONS_00031668 other downstream 5571267 56463211 ~ 56476884 (+) True XLOC_015985

Expression Profile


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