Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU476240 |
| length | 322 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 1 |
| gene id | G420233 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 58086943 ~ 58087264 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU476167 | lncRNA | downstream | 3220 | 58032121 ~ 58083723 (-) | True | G420179 |
| TU476196 | lncRNA | downstream | 56089 | 58028971 ~ 58030854 (-) | False | G420194 |
| TU476198 | lncRNA | downstream | 56089 | 58028971 ~ 58030854 (-) | True | G420194 |
| TU476197 | lncRNA | downstream | 56998 | 58028971 ~ 58029945 (-) | False | G420194 |
| TU476175 | lncRNA | downstream | 64140 | 58022286 ~ 58022803 (-) | True | G420184 |
| TU476192 | lncRNA | upstream | 2478 | 58089742 ~ 58090474 (-) | False | G420192 |
| TU476191 | lncRNA | upstream | 2730 | 58089994 ~ 58090474 (-) | True | G420192 |
| TU476188 | lncRNA | upstream | 3352 | 58090616 ~ 58094462 (-) | True | LOC110524138 |
| TU476243 | lncRNA | upstream | 22393 | 58109657 ~ 58110712 (-) | False | G420236 |
| TU476247 | lncRNA | upstream | 22393 | 58109657 ~ 58111292 (-) | False | G420236 |
| XM_021603494.2 | mRNA | downstream | 5068 | 58033672 ~ 58081875 (-) | False | homer3b |
| XM_021603495.2 | mRNA | downstream | 5068 | 58033672 ~ 58081875 (-) | False | homer3b |
| XM_021603496.2 | mRNA | downstream | 5068 | 58033672 ~ 58081875 (-) | True | homer3b |
| XR_002473385.2 | mRNA | downstream | 72283 | 58002584 ~ 58014660 (-) | True | LOC110522874 |
| XM_021603492.2 | mRNA | downstream | 88503 | 57989745 ~ 57998440 (-) | True | LOC110524135 |
| XM_021603498.2 | mRNA | upstream | 5047 | 58092311 ~ 58109445 (-) | False | LOC110524138 |
| XM_021603499.2 | mRNA | upstream | 5047 | 58092311 ~ 58109445 (-) | False | LOC110524138 |
| XM_021603500.2 | mRNA | upstream | 5047 | 58092311 ~ 58109445 (-) | False | LOC110524138 |
| XM_021603501.2 | mRNA | upstream | 5047 | 58092311 ~ 58109445 (-) | False | LOC110524138 |
| XM_036976510.1 | mRNA | upstream | 28534 | 58115798 ~ 58120039 (-) | False | pgpi |
| TU475656 | other | downstream | 381007 | 57699745 ~ 57705936 (-) | True | G419714 |
| TU475533 | other | downstream | 460769 | 57620054 ~ 57626174 (-) | True | LOC110524128 |
| TU475541 | other | downstream | 475376 | 57611059 ~ 57611567 (-) | True | G419603 |
| TU474707 | other | downstream | 1252348 | 56834026 ~ 56834595 (-) | True | G418830 |
| TU474560 | other | downstream | 1375559 | 56710280 ~ 56711384 (-) | True | LOC110522975 |
| TU476193 | other | upstream | 25123 | 58112387 ~ 58114060 (-) | True | G420193 |
| TU476443 | other | upstream | 325864 | 58413128 ~ 58414143 (-) | True | G420421 |
| TU477090 | other | upstream | 938839 | 59026103 ~ 59036299 (-) | True | G420982 |
| TU477230 | other | upstream | 1045606 | 59132870 ~ 59138257 (-) | True | lsg1 |
| TU478587 | other | upstream | 2013501 | 60100765 ~ 60101056 (-) | True | G422347 |
