Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU476354 |
| length | 325 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 1 |
| gene id | G420339 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 58286493 ~ 58286817 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU476353 | lncRNA | downstream | 1340 | 58284918 ~ 58285153 (-) | True | G420338 |
| TU476351 | lncRNA | downstream | 3564 | 58282728 ~ 58282929 (-) | True | G420336 |
| TU476342 | lncRNA | downstream | 15468 | 58270747 ~ 58271025 (-) | True | G420327 |
| TU476335 | lncRNA | downstream | 26616 | 58259621 ~ 58259877 (-) | True | G420320 |
| TU476331 | lncRNA | downstream | 31937 | 58254331 ~ 58254556 (-) | True | G420316 |
| TU476356 | lncRNA | upstream | 1253 | 58288070 ~ 58288306 (-) | True | G420341 |
| TU476391 | lncRNA | upstream | 80459 | 58367276 ~ 58368524 (-) | False | G420370 |
| TU476390 | lncRNA | upstream | 81293 | 58368110 ~ 58368693 (-) | True | G420370 |
| TU476384 | lncRNA | upstream | 82090 | 58368907 ~ 58370010 (-) | False | G420368 |
| TU476383 | lncRNA | upstream | 82570 | 58369387 ~ 58369790 (-) | True | G420368 |
| XM_021603504.2 | mRNA | downstream | 99444 | 58163918 ~ 58187049 (-) | True | LOC110524141 |
| XM_036976510.1 | mRNA | downstream | 166454 | 58115798 ~ 58120039 (-) | False | pgpi |
| NM_001160660.1 | mRNA | downstream | 166460 | 58115817 ~ 58120033 (-) | True | pgpi |
| XM_021603500.2 | mRNA | downstream | 177048 | 58092311 ~ 58109445 (-) | False | LOC110524138 |
| LOC118964716 | mRNA | upstream | 90741 | 58377558 ~ 58380045 (-) | True | LOC118964716 |
| XM_021603517.2 | mRNA | upstream | 92963 | 58379780 ~ 58394796 (-) | False | LOC110524144 |
| XM_036977959.1 | mRNA | upstream | 92963 | 58379780 ~ 58409320 (-) | False | LOC110524144 |
| XM_021603522.2 | mRNA | upstream | 130055 | 58416872 ~ 58454099 (-) | False | mast3b |
| XM_021603520.2 | mRNA | upstream | 130055 | 58416872 ~ 58475232 (-) | False | mast3b |
| TU476193 | other | downstream | 172433 | 58112387 ~ 58114060 (-) | True | G420193 |
| TU475656 | other | downstream | 580557 | 57699745 ~ 57705936 (-) | True | G419714 |
| TU475533 | other | downstream | 660319 | 57620054 ~ 57626174 (-) | True | LOC110524128 |
| TU475541 | other | downstream | 674926 | 57611059 ~ 57611567 (-) | True | G419603 |
| TU474707 | other | downstream | 1451898 | 56834026 ~ 56834595 (-) | True | G418830 |
| TU476443 | other | upstream | 126311 | 58413128 ~ 58414143 (-) | True | G420421 |
| TU477090 | other | upstream | 739286 | 59026103 ~ 59036299 (-) | True | G420982 |
| TU477230 | other | upstream | 846053 | 59132870 ~ 59138257 (-) | True | lsg1 |
| TU478587 | other | upstream | 1813948 | 60100765 ~ 60101056 (-) | True | G422347 |
| TU479791 | other | upstream | 2772177 | 61058994 ~ 61071143 (-) | True | LOC110524239 |
