Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU477191 |
| length | 226 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 1 |
| gene id | G421077 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 59121060 ~ 59121285 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU477087 | lncRNA | downstream | 67323 | 59047705 ~ 59053737 (-) | True | G420981 |
| TU477148 | lncRNA | downstream | 75413 | 59045370 ~ 59045647 (-) | True | G421034 |
| TU477101 | lncRNA | downstream | 171067 | 58949757 ~ 58949993 (-) | True | G420992 |
| TU477062 | lncRNA | downstream | 213716 | 58907063 ~ 58907344 (-) | True | G420968 |
| TU477057 | lncRNA | downstream | 218312 | 58899153 ~ 58902748 (-) | False | G420964 |
| TU477193 | lncRNA | upstream | 464 | 59121749 ~ 59122035 (-) | True | G421079 |
| TU477256 | lncRNA | upstream | 45088 | 59166373 ~ 59166782 (-) | True | G421137 |
| TU477257 | lncRNA | upstream | 45628 | 59166913 ~ 59169292 (-) | True | G421138 |
| TU477260 | lncRNA | upstream | 50841 | 59172126 ~ 59172338 (-) | True | G421141 |
| TU477263 | lncRNA | upstream | 52329 | 59173614 ~ 59173934 (-) | True | G421144 |
| XM_021603568.2 | mRNA | downstream | 5955 | 59055120 ~ 59115105 (-) | False | atp13a3 |
| XM_021603569.2 | mRNA | downstream | 5955 | 59055120 ~ 59115105 (-) | False | atp13a3 |
| XM_036977976.1 | mRNA | downstream | 5955 | 59055120 ~ 59115105 (-) | False | atp13a3 |
| XM_036977977.1 | mRNA | downstream | 5955 | 59055120 ~ 59115105 (-) | True | atp13a3 |
| trnaa-ugc-13 | mRNA | downstream | 94462 | 59026526 ~ 59026598 (-) | True | trnaa-ugc-13 |
| XM_021603572.2 | mRNA | upstream | 3796 | 59125081 ~ 59131011 (-) | False | tmem44 |
| XM_021603573.2 | mRNA | upstream | 3796 | 59125081 ~ 59131011 (-) | True | tmem44 |
| XM_021603571.2 | mRNA | upstream | 9867 | 59131152 ~ 59138429 (-) | False | lsg1 |
| XM_036977978.1 | mRNA | upstream | 238601 | 59359886 ~ 59448197 (-) | True | LOC110524182 |
| XM_021603592.2 | mRNA | upstream | 347495 | 59468780 ~ 59563672 (-) | False | LOC110524184 |
| TU477090 | other | downstream | 84761 | 59026103 ~ 59036299 (-) | True | G420982 |
| TU476443 | other | downstream | 706917 | 58413128 ~ 58414143 (-) | True | G420421 |
| TU476193 | other | downstream | 1007000 | 58112387 ~ 58114060 (-) | True | G420193 |
| TU475656 | other | downstream | 1415124 | 57699745 ~ 57705936 (-) | True | G419714 |
| TU475533 | other | downstream | 1494886 | 57620054 ~ 57626174 (-) | True | LOC110524128 |
| TU477230 | other | upstream | 11585 | 59132870 ~ 59138257 (-) | True | lsg1 |
| TU478587 | other | upstream | 979480 | 60100765 ~ 60101056 (-) | True | G422347 |
| TU479791 | other | upstream | 1937709 | 61058994 ~ 61071143 (-) | True | LOC110524239 |
| TU480894 | other | upstream | 2495585 | 61616870 ~ 61617244 (-) | True | G424474 |
| TU480919 | other | upstream | 2528682 | 61649967 ~ 61651775 (-) | True | G424499 |
