Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU478137 |
| length | 581 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G421940 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 59359109 ~ 59359689 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU478132 | lncRNA | downstream | 6784 | 59350846 ~ 59352325 (-) | True | G421935 |
| TU477263 | lncRNA | downstream | 185175 | 59173614 ~ 59173934 (-) | True | G421144 |
| TU477260 | lncRNA | downstream | 186771 | 59172126 ~ 59172338 (-) | True | G421141 |
| TU477257 | lncRNA | downstream | 189817 | 59166913 ~ 59169292 (-) | True | G421138 |
| TU477256 | lncRNA | downstream | 192327 | 59166373 ~ 59166782 (-) | True | G421137 |
| TU478146 | lncRNA | upstream | 10960 | 59370649 ~ 59371499 (-) | False | G421948 |
| TU478145 | lncRNA | upstream | 11291 | 59370980 ~ 59371499 (-) | True | G421948 |
| TU478148 | lncRNA | upstream | 12630 | 59372319 ~ 59372754 (-) | True | G421950 |
| TU478149 | lncRNA | upstream | 13296 | 59372985 ~ 59373605 (-) | False | G421951 |
| TU478150 | lncRNA | upstream | 13296 | 59372985 ~ 59373391 (-) | True | G421951 |
| XM_021603571.2 | mRNA | downstream | 220680 | 59131152 ~ 59138429 (-) | False | lsg1 |
| XM_021603572.2 | mRNA | downstream | 228098 | 59125081 ~ 59131011 (-) | False | tmem44 |
| XM_021603573.2 | mRNA | downstream | 228098 | 59125081 ~ 59131011 (-) | True | tmem44 |
| XM_036977976.1 | mRNA | downstream | 244004 | 59055120 ~ 59115105 (-) | False | atp13a3 |
| XM_036977978.1 | mRNA | upstream | 197 | 59359886 ~ 59448197 (-) | True | LOC110524182 |
| XM_021603592.2 | mRNA | upstream | 109091 | 59468780 ~ 59563672 (-) | False | LOC110524184 |
| XM_021603585.2 | mRNA | upstream | 109091 | 59468780 ~ 59563673 (-) | False | LOC110524184 |
| XM_021603587.2 | mRNA | upstream | 109091 | 59468780 ~ 59563673 (-) | False | LOC110524184 |
| XM_021603588.2 | mRNA | upstream | 109091 | 59468780 ~ 59563673 (-) | False | LOC110524184 |
| TU477230 | other | downstream | 220852 | 59132870 ~ 59138257 (-) | True | lsg1 |
| TU477090 | other | downstream | 322810 | 59026103 ~ 59036299 (-) | True | G420982 |
| TU476443 | other | downstream | 944966 | 58413128 ~ 58414143 (-) | True | G420421 |
| TU476193 | other | downstream | 1245049 | 58112387 ~ 58114060 (-) | True | G420193 |
| TU475656 | other | downstream | 1653173 | 57699745 ~ 57705936 (-) | True | G419714 |
| TU478587 | other | upstream | 741076 | 60100765 ~ 60101056 (-) | True | G422347 |
| TU479791 | other | upstream | 1699305 | 61058994 ~ 61071143 (-) | True | LOC110524239 |
| TU480894 | other | upstream | 2257181 | 61616870 ~ 61617244 (-) | True | G424474 |
| TU480919 | other | upstream | 2290278 | 61649967 ~ 61651775 (-) | True | G424499 |
| TU480929 | other | upstream | 2299344 | 61659033 ~ 61659585 (-) | True | G424502 |
