Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU479380 |
| length | 334 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 2 |
| gene id | G423073 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 60360590 ~ 60362946 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU478728 | lncRNA | downstream | 50519 | 60308829 ~ 60310071 (-) | True | G422481 |
| TU478721 | lncRNA | downstream | 64103 | 60296174 ~ 60296487 (-) | True | G422474 |
| TU478718 | lncRNA | downstream | 66882 | 60293502 ~ 60293708 (-) | True | G422471 |
| TU478715 | lncRNA | downstream | 80144 | 60280128 ~ 60280446 (-) | True | G422468 |
| TU478713 | lncRNA | downstream | 81449 | 60278932 ~ 60279141 (-) | True | G422466 |
| TU479360 | lncRNA | upstream | 5483 | 60368429 ~ 60393194 (-) | False | G423057 |
| TU479361 | lncRNA | upstream | 5483 | 60368429 ~ 60393194 (-) | False | G423057 |
| TU479359 | lncRNA | upstream | 24190 | 60387136 ~ 60393194 (-) | True | G423057 |
| TU479358 | lncRNA | upstream | 32323 | 60395269 ~ 60398805 (-) | True | LOC110524214 |
| TU479402 | lncRNA | upstream | 58938 | 60421884 ~ 60422186 (-) | True | G423095 |
| NM_001124604.1 | mRNA | downstream | 53950 | 60298204 ~ 60306640 (-) | True | lpl |
| XM_021603652.2 | mRNA | downstream | 71159 | 60282374 ~ 60289431 (-) | True | LOC110524209 |
| XM_021603647.2 | mRNA | downstream | 226318 | 60116530 ~ 60134272 (-) | True | LOC110524206 |
| XM_021603643.2 | mRNA | downstream | 378971 | 59979007 ~ 59981619 (-) | True | klf2a |
| XR_005051823.1 | mRNA | downstream | 446314 | 59904845 ~ 59914276 (-) | False | LOC118964630 |
| XM_021603661.2 | mRNA | upstream | 32078 | 60395024 ~ 60398861 (-) | False | LOC110524214 |
| XM_021603660.2 | mRNA | upstream | 32648 | 60395594 ~ 60398862 (-) | False | LOC110524214 |
| XR_005051825.1 | mRNA | upstream | 51217 | 60414163 ~ 60426534 (-) | True | LOC118964632 |
| XM_021603665.2 | mRNA | upstream | 96901 | 60459847 ~ 60462191 (-) | False | ccl44 |
| XM_021603666.2 | mRNA | upstream | 96901 | 60459847 ~ 60462193 (-) | False | ccl44 |
| TU478587 | other | downstream | 259534 | 60100765 ~ 60101056 (-) | True | G422347 |
| TU477230 | other | downstream | 1222333 | 59132870 ~ 59138257 (-) | True | lsg1 |
| TU477090 | other | downstream | 1324291 | 59026103 ~ 59036299 (-) | True | G420982 |
| TU476443 | other | downstream | 1946447 | 58413128 ~ 58414143 (-) | True | G420421 |
| TU476193 | other | downstream | 2246530 | 58112387 ~ 58114060 (-) | True | G420193 |
| TU479791 | other | upstream | 696048 | 61058994 ~ 61071143 (-) | True | LOC110524239 |
| TU480894 | other | upstream | 1253924 | 61616870 ~ 61617244 (-) | True | G424474 |
| TU480919 | other | upstream | 1287021 | 61649967 ~ 61651775 (-) | True | G424499 |
| TU480929 | other | upstream | 1296087 | 61659033 ~ 61659585 (-) | True | G424502 |
| TU481096 | other | upstream | 1525252 | 61888198 ~ 61927422 (-) | False | G424649 |
