Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU480231 |
| length | 405 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 1 |
| gene id | G423874 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 61655986 ~ 61656390 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU480238 | lncRNA | upstream | 11005 | 61644672 ~ 61644981 (+) | True | G423881 |
| TU480232 | lncRNA | upstream | 17444 | 61638322 ~ 61638542 (+) | True | G423875 |
| TU480228 | lncRNA | upstream | 21355 | 61634344 ~ 61634631 (+) | True | G423871 |
| TU480216 | lncRNA | upstream | 34609 | 61620898 ~ 61621377 (+) | True | G423859 |
| TU480215 | lncRNA | upstream | 35851 | 61619835 ~ 61620135 (+) | True | G423858 |
| TU480258 | lncRNA | downstream | 23231 | 61679621 ~ 61679853 (+) | True | G423901 |
| TU480263 | lncRNA | downstream | 29022 | 61685412 ~ 61685626 (+) | True | G423906 |
| TU480264 | lncRNA | downstream | 34318 | 61690708 ~ 61743853 (+) | False | G423907 |
| TU480268 | lncRNA | downstream | 40497 | 61696887 ~ 61772270 (+) | False | G423907 |
| TU480270 | lncRNA | downstream | 40497 | 61696887 ~ 61743853 (+) | False | G423907 |
| XR_005051827.1 | mRNA | upstream | 791 | 61637104 ~ 61655195 (+) | True | LOC110524248 |
| XM_021603721.2 | mRNA | upstream | 878 | 61637104 ~ 61655108 (+) | False | LOC110524248 |
| XM_021603722.2 | mRNA | upstream | 878 | 61637104 ~ 61655108 (+) | False | LOC110524248 |
| XM_021603719.2 | mRNA | upstream | 56654 | 61590603 ~ 61599332 (+) | True | nr2c2ap |
| XM_036978014.1 | mRNA | upstream | 370320 | 61267215 ~ 61285666 (+) | True | hapln4 |
| XM_021603725.2 | mRNA | downstream | 130057 | 61786447 ~ 61793643 (+) | False | LOC110524251 |
| XM_021603726.2 | mRNA | downstream | 130057 | 61786447 ~ 61793643 (+) | False | LOC110524251 |
| XM_021603727.2 | mRNA | downstream | 130057 | 61786447 ~ 61793643 (+) | False | LOC110524251 |
| XM_021603728.2 | mRNA | downstream | 130057 | 61786447 ~ 61793643 (+) | True | LOC110524251 |
| XM_021603732.2 | mRNA | downstream | 152492 | 61808882 ~ 61840823 (+) | False | gatad2ab |
| TU478964 | other | upstream | 960081 | 60694257 ~ 60695905 (+) | True | LOC110524226 |
| TU476694 | other | upstream | 2711769 | 58942728 ~ 58944217 (+) | True | G420634 |
| TU476101 | other | upstream | 3239210 | 58413123 ~ 58416776 (+) | False | G420117 |
| TU475377 | other | upstream | 3756338 | 57884380 ~ 57899648 (+) | True | G419452 |
| TU475029 | other | upstream | 4288649 | 57365364 ~ 57367337 (+) | True | LOC110524119 |
| TU480287 | other | downstream | 65147 | 61721537 ~ 61722024 (+) | True | G423922 |
| TU480458 | other | downstream | 449133 | 62105523 ~ 62105872 (+) | True | G424079 |
| TU480579 | other | downstream | 626762 | 62283152 ~ 62306937 (+) | False | LOC110524265 |
| TU481721 | other | downstream | 1388700 | 63045090 ~ 63051530 (+) | True | G425224 |
| TU482675 | other | downstream | 2020024 | 63676414 ~ 63684239 (+) | True | nfil3-4 |
