Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU485180 |
| length | 270 |
| lncRNA type | inter_gene |
| GC content | 0.56 |
| exon number | 1 |
| gene id | G428321 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 65697439 ~ 65697708 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU484625 | lncRNA | upstream | 36000 | 65658954 ~ 65661439 (+) | True | notch2 |
| TU484657 | lncRNA | upstream | 40345 | 65656771 ~ 65657094 (+) | True | G427860 |
| TU484656 | lncRNA | upstream | 43362 | 65653676 ~ 65654077 (+) | True | G427859 |
| TU484635 | lncRNA | upstream | 54357 | 65606510 ~ 65643082 (+) | True | G427838 |
| TU484624 | lncRNA | upstream | 101417 | 65595774 ~ 65596022 (+) | True | G427829 |
| TU485229 | lncRNA | downstream | 39271 | 65736979 ~ 65737304 (+) | True | G428365 |
| TU485234 | lncRNA | downstream | 46014 | 65743722 ~ 65744337 (+) | True | G428370 |
| TU485238 | lncRNA | downstream | 59024 | 65756732 ~ 65757008 (+) | True | G428374 |
| TU485239 | lncRNA | downstream | 64978 | 65762686 ~ 65762936 (+) | True | G428375 |
| TU485243 | lncRNA | downstream | 72151 | 65769859 ~ 65770273 (+) | True | G428379 |
| XM_036978103.1 | mRNA | upstream | 19598 | 65661962 ~ 65677841 (+) | True | slc35a3a |
| XM_036978102.1 | mRNA | upstream | 35990 | 65604119 ~ 65661449 (+) | False | notch2 |
| XM_021601272.2 | mRNA | upstream | 106691 | 65587136 ~ 65590748 (+) | False | sec22bb |
| NM_001165250.1 | mRNA | upstream | 106692 | 65587181 ~ 65590747 (+) | True | sec22bb |
| XM_021603931.2 | mRNA | upstream | 110432 | 65581422 ~ 65587007 (+) | True | LOC110524356 |
| XM_021603937.2 | mRNA | downstream | 5859 | 65703567 ~ 65705429 (+) | True | foxe3 |
| XM_021603939.2 | mRNA | downstream | 15758 | 65713466 ~ 65715867 (+) | True | foxd2 |
| XM_021603948.2 | mRNA | downstream | 356256 | 66053964 ~ 66058160 (+) | False | znf692 |
| XM_021603949.2 | mRNA | downstream | 356256 | 66053964 ~ 66058160 (+) | False | znf692 |
| XM_036978110.1 | mRNA | downstream | 356256 | 66053964 ~ 66058160 (+) | False | znf692 |
| TU484533 | other | upstream | 176059 | 65453856 ~ 65521380 (+) | True | G427747 |
| TU484227 | other | upstream | 668737 | 65024715 ~ 65028702 (+) | False | LOC110524338 |
| TU485654 | other | downstream | 444371 | 66142079 ~ 66142605 (+) | True | G428696 |
| TU486149 | other | downstream | 1284241 | 66981949 ~ 67048164 (+) | True | G429156 |
| TU487389 | other | downstream | 1763021 | 67460729 ~ 67464143 (+) | False | LOC110524407 |
| TU487402 | other | downstream | 1763021 | 67460729 ~ 67464323 (+) | True | LOC110524407 |
| TU487928 | other | downstream | 2405471 | 68103179 ~ 68103534 (+) | True | G430796 |
