Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU485586 |
| length | 399 |
| lncRNA type | antisense_over |
| GC content | 0.49 |
| exon number | 2 |
| gene id | G428633 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 66054035 ~ 66054742 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU485558 | lncRNA | downstream | 11212 | 66042611 ~ 66042823 (-) | True | G428622 |
| TU485556 | lncRNA | downstream | 14072 | 66039751 ~ 66039963 (-) | True | G428620 |
| TU485551 | lncRNA | downstream | 15476 | 66038192 ~ 66038559 (-) | True | G428615 |
| TU485545 | lncRNA | downstream | 17695 | 66025895 ~ 66036340 (-) | True | G428610 |
| TU485519 | lncRNA | downstream | 29296 | 66008284 ~ 66024739 (-) | True | G428588 |
| TU486231 | lncRNA | upstream | 52096 | 66106838 ~ 66108450 (-) | True | rfx2 |
| TU486239 | lncRNA | upstream | 68319 | 66123061 ~ 66123611 (-) | True | G429244 |
| TU486242 | lncRNA | upstream | 81406 | 66136148 ~ 66136396 (-) | True | G429247 |
| TU486235 | lncRNA | upstream | 108703 | 66163445 ~ 66163684 (-) | True | G429240 |
| TU486251 | lncRNA | upstream | 122057 | 66176799 ~ 66177054 (-) | True | G429255 |
| XM_021603943.2 | mRNA | downstream | 3837 | 66045863 ~ 66050198 (-) | True | LOC110524366 |
| XM_021603944.2 | mRNA | downstream | 3844 | 66045863 ~ 66050191 (-) | False | LOC110524366 |
| XM_036978105.1 | mRNA | downstream | 3848 | 66045863 ~ 66050187 (-) | False | LOC110524366 |
| XM_036978106.1 | mRNA | downstream | 3848 | 66045863 ~ 66050187 (-) | False | LOC110524366 |
| XM_036978107.1 | mRNA | downstream | 3853 | 66045863 ~ 66050182 (-) | False | LOC110524366 |
| XM_036978112.1 | mRNA | upstream | 52095 | 66106837 ~ 66175123 (-) | False | rfx2 |
| XM_036978113.1 | mRNA | upstream | 52095 | 66106837 ~ 66175123 (-) | False | rfx2 |
| XM_021603955.2 | mRNA | upstream | 158755 | 66213497 ~ 66241138 (-) | False | mllt1a |
| XM_021603956.2 | mRNA | upstream | 158755 | 66213497 ~ 66241138 (-) | True | mllt1a |
| XM_021603957.2 | mRNA | upstream | 189638 | 66244380 ~ 66249228 (-) | True | acer1 |
| TU484971 | other | downstream | 671445 | 65370116 ~ 65382590 (-) | False | G428132 |
| TU484709 | other | downstream | 1042437 | 64999708 ~ 65011598 (-) | False | G427902 |
| TU484689 | other | downstream | 1143037 | 64905045 ~ 64910998 (-) | True | LOC110524332 |
| TU484039 | other | downstream | 1321063 | 64725927 ~ 64732972 (-) | True | LOC110524330 |
| TU484034 | other | downstream | 1348010 | 64701874 ~ 64706025 (-) | False | LOC110524330 |
| TU486620 | other | upstream | 732309 | 66787051 ~ 66789836 (-) | True | LOC110524398 |
| TU488974 | other | upstream | 1755863 | 67810605 ~ 67816544 (-) | False | lrrc7 |
| TU488969 | other | upstream | 1756744 | 67811486 ~ 67818124 (-) | True | lrrc7 |
| TU489232 | other | upstream | 2285462 | 68340204 ~ 68352745 (-) | True | bend5 |
| TU489586 | other | upstream | 2645079 | 68699821 ~ 68707448 (-) | True | G432310 |
