RNA id: TU491076



Basic Information


Item Value
RNA id TU491076
length 211
lncRNA type antisense_over
GC content 0.53
exon number 1
gene id G433682
representative True

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 69486194 ~ 69486404 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


CCTTGAGTATTTGGGCGAGCGAGACGCTTTCATGCTGAGCCAGAGACACGCCCCTCAGCCGCTCCACGTCACCCAGCTGACGCACTGACTCCTCTATAGATTCCAGGTAATTGAGTTCTGCAGACATACGCTGCTGCAACACCCCTGGGGTGTAGTGGAGATCACCTGGACAATAAAGAGACGGAtagaaacaaagagagggagagttaaG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU491074 lncRNA downstream 1405 69484337 ~ 69484789 (-) True G433680
TU491063 lncRNA downstream 15873 69469764 ~ 69470321 (-) True G433670
TU491062 lncRNA downstream 16822 69469043 ~ 69469372 (-) True G433669
TU489745 lncRNA downstream 299235 69182924 ~ 69186959 (-) True LOC110524437
TU489772 lncRNA downstream 336368 69147630 ~ 69149826 (-) True G432448
TU491078 lncRNA upstream 2 69486406 ~ 69524790 (-) False G433683
TU491083 lncRNA upstream 3046 69489450 ~ 69489758 (-) True G433688
TU491098 lncRNA upstream 16110 69502514 ~ 69504926 (-) True G433697
TU491134 lncRNA upstream 68615 69555019 ~ 69556491 (-) True G433725
TU491147 lncRNA upstream 169605 69656009 ~ 69703291 (-) False G433735
XM_036978235.1 mRNA downstream 135643 69239531 ~ 69350551 (-) True LOC110524442
XM_036978234.1 mRNA downstream 135644 69239531 ~ 69350550 (-) False LOC110524442
XM_036978237.1 mRNA downstream 135644 69239531 ~ 69350550 (-) False LOC110524442
XM_036978236.1 mRNA downstream 135645 69239531 ~ 69350549 (-) False LOC110524442
XM_036978245.1 mRNA upstream 65399 69551803 ~ 69619075 (-) True LOC110524447
XM_021604088.2 mRNA upstream 218467 69704871 ~ 69714329 (-) False LOC110524449
XM_021604087.2 mRNA upstream 218467 69704871 ~ 69714330 (-) True LOC110524449
XM_021604089.2 mRNA upstream 228878 69715282 ~ 69728407 (-) False LOC110524450
XM_021604090.2 mRNA upstream 228878 69715282 ~ 69728426 (-) True LOC110524450
TU489837 other downstream 480088 69004619 ~ 69006106 (-) True G432513
TU489614 other downstream 731137 68750217 ~ 68755057 (-) True G432338
TU489586 other downstream 778746 68699821 ~ 68707448 (-) True G432310
TU489232 other downstream 1133449 68340204 ~ 68352745 (-) True bend5
TU488969 other downstream 1668070 67811486 ~ 67818124 (-) True lrrc7
TU491077 other upstream 36410 69522814 ~ 69524790 (-) True G433683
TU492773 other upstream 1504488 70990892 ~ 70991798 (-) True G435234
TU492700 other upstream 1581621 71068025 ~ 71068887 (-) True G435176
TU492901 other upstream 1742778 71229182 ~ 71230589 (-) True LOC110524478
TU492898 other upstream 1799986 71286390 ~ 71286992 (-) True il23r

Expression Profile