RNA id: TU492776



Basic Information


Item Value
RNA id TU492776
length 255
lncRNA type intronic
GC content 0.36
exon number 1
gene id G435237
representative True

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 70994594 ~ 70994848 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gacttacacatggaataaacaaaacatacagtcaataatacagtagaacaaaagaaaacaaaaagtctatacacagtgagtgcaaatgaggtaagttaaggaaataaataggccatggtggcgaagtaattacaatatagcaattaaacactggaatggtagatcggcagaagatgaatgtgcaggtagagatactggggtgcaaaggagcaaaataaataaataaatagataccagtatggggatgaggtaggt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU492775 lncRNA downstream 141 70994222 ~ 70994453 (-) True G435236
TU492762 lncRNA downstream 4628 70989074 ~ 70989966 (-) True G435233
TU492757 lncRNA downstream 9244 70984908 ~ 70985350 (-) True G435232
TU492753 lncRNA downstream 11859 70982528 ~ 70982735 (-) True G435228
TU492739 lncRNA downstream 34018 70960300 ~ 70960576 (-) True G435214
TU492779 lncRNA upstream 3934 70998782 ~ 70999092 (-) True G435240
TU492782 lncRNA upstream 8829 71003677 ~ 71003948 (-) True G435243
TU492783 lncRNA upstream 9401 71004249 ~ 71004469 (-) True G435244
TU492787 lncRNA upstream 11386 71006234 ~ 71010603 (-) True G435246
TU492706 lncRNA upstream 22556 71017404 ~ 71019623 (-) True G435182
XM_021604127.2 mRNA downstream 124197 70836815 ~ 70870397 (-) False LOC110524463
XM_021604129.2 mRNA downstream 124197 70836815 ~ 70870397 (-) True LOC110524463
XM_021604131.2 mRNA downstream 124216 70836815 ~ 70870378 (-) False LOC110524463
XM_036978258.1 mRNA downstream 124217 70836815 ~ 70870377 (-) False LOC110524463
XM_036979053.1 mRNA downstream 989877 69950204 ~ 70004717 (-) False LOC110524459
XM_036978272.1 mRNA upstream 26824 71021672 ~ 71033161 (-) False LOC110524467
XM_036978273.1 mRNA upstream 26824 71021672 ~ 71033577 (-) False LOC110524467
XM_036978274.1 mRNA upstream 27762 71022610 ~ 71033161 (-) False LOC110524467
XM_036978275.1 mRNA upstream 27819 71022667 ~ 71033161 (-) True LOC110524467
XM_021604145.2 mRNA upstream 51194 71046042 ~ 71056219 (-) False LOC110524468
TU492773 other downstream 2796 70990892 ~ 70991798 (-) True G435234
TU491077 other downstream 1469804 69522814 ~ 69524790 (-) True G433683
TU489837 other downstream 1988488 69004619 ~ 69006106 (-) True G432513
TU489614 other downstream 2239537 68750217 ~ 68755057 (-) True G432338
TU489586 other downstream 2287146 68699821 ~ 68707448 (-) True G432310
TU492700 other upstream 73177 71068025 ~ 71068887 (-) True G435176
TU492901 other upstream 234334 71229182 ~ 71230589 (-) True LOC110524478
TU492898 other upstream 291542 71286390 ~ 71286992 (-) True il23r
TU493828 other upstream 1046114 72040962 ~ 72121697 (-) True G436172
TU494572 other upstream 1593436 72588284 ~ 72588576 (-) True G436830

Expression Profile