RNA id: TU494839



Basic Information


Item Value
RNA id TU494839
length 240
lncRNA type antisense_over
GC content 0.40
exon number 1
gene id G437069
representative True

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 73114613 ~ 73114852 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ATCTTAAAGTTTAGTCCAGTCACACTTTTCCGCTGATGTAATGTTGCTTGAtcagtggttaggctattagctggacaAAATCAGGCTActtgaaaagtgcaatactgttaatataaccgtgTGTTATTGCAGGGTTTCAGTGAATTTATGACAATCATGCAGAAAATGTTtcacaggaaaattctcagcgaCAACCGAGTCATCAAATTCAGATCCCTCAACAAGGGTAGAGCCTAAGGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU494837 lncRNA downstream 884 73113458 ~ 73113729 (-) True G437067
TU494836 lncRNA downstream 1281 73113122 ~ 73113332 (-) True G437066
TU494834 lncRNA downstream 2809 73111605 ~ 73111804 (-) True G437064
TU494832 lncRNA downstream 8827 73105127 ~ 73105786 (-) True G437062
TU494811 lncRNA downstream 36371 73077831 ~ 73078242 (-) True G437046
TU494843 lncRNA upstream 6549 73121401 ~ 73122027 (-) True G437073
TU494845 lncRNA upstream 10568 73125420 ~ 73126364 (-) True G437075
TU494855 lncRNA upstream 40790 73155642 ~ 73163384 (-) True LOC110524523
TU495113 lncRNA upstream 325392 73440244 ~ 73440536 (-) True G437318
TU495538 lncRNA upstream 371815 73486667 ~ 73488455 (-) True G437660
XM_021604248.2 mRNA downstream 4710 73106039 ~ 73109903 (-) True LOC110524520
XM_021604246.2 mRNA downstream 52199 73053844 ~ 73062414 (-) False LOC110524518
XM_021604243.2 mRNA downstream 104212 73005255 ~ 73010401 (-) False LOC110524517
XM_021604252.2 mRNA upstream 17250 73132102 ~ 73163431 (-) False LOC110524523
XM_021604253.2 mRNA upstream 59854 73174706 ~ 73180889 (-) True LOC110524524
XM_036976526.1 mRNA upstream 73173 73188025 ~ 73188938 (-) True LOC110522885
XM_021604256.2 mRNA upstream 93008 73207860 ~ 73218158 (-) True LOC100135942
XM_036978342.1 mRNA upstream 255587 73370439 ~ 73419304 (-) False LOC110524526
TU494824 other downstream 19277 73094794 ~ 73095336 (-) True G437054
TU494616 other downstream 338745 72774561 ~ 72775868 (-) True G436873
TU494589 other downstream 441787 72672154 ~ 72672826 (-) True G436847
TU494584 other downstream 497669 72616296 ~ 72616944 (-) True G436842
TU494572 other downstream 526037 72588284 ~ 72588576 (-) True G436830
TU494844 other upstream 7260 73122112 ~ 73125038 (-) True G437074
TU494857 other upstream 31506 73146358 ~ 73147128 (-) False G437079
TU494858 other upstream 31506 73146358 ~ 73147128 (-) False G437079
TU494859 other upstream 31506 73146358 ~ 73147128 (-) True G437079
TU495056 other upstream 255756 73370608 ~ 73410339 (-) True LOC110524526

Expression Profile