RNA id: TU495566



Basic Information


Item Value
RNA id TU495566
length 240
lncRNA type antisense_over
GC content 0.54
exon number 3
gene id G437680
representative True

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 73531608 ~ 73532196 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


TTGGCCTGAGGCCGGGGTGGCaggtctcctctctgggAGTGAGTGGGACTGGACACGATGTCAGGCTTCTCTGGTTTGTCATCATCGTGGCTGATCTGTTGAACAGCAGTGACCTCCACCACTGTCTCATCATGGGGCTCCACCACTGAGTCATCAGGTGTATCATCTGTAGACGCCTTCTCAAGCATTttcttcctcttctgtctctgaGCCTTCAGGTTGCGTCTCAGTGTATCTCCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU495538 lncRNA downstream 43153 73486667 ~ 73488455 (-) True G437660
TU495113 lncRNA downstream 91072 73440244 ~ 73440536 (-) True G437318
TU494855 lncRNA downstream 368224 73155642 ~ 73163384 (-) True LOC110524523
TU494845 lncRNA downstream 405244 73125420 ~ 73126364 (-) True G437075
TU494843 lncRNA downstream 409581 73121401 ~ 73122027 (-) True G437073
TU495601 lncRNA upstream 61898 73594094 ~ 73594489 (-) True G437705
TU495599 lncRNA upstream 65181 73597377 ~ 73598010 (-) True G437703
TU495606 lncRNA upstream 68875 73601071 ~ 73601626 (-) True G437709
TU495607 lncRNA upstream 69488 73601684 ~ 73601912 (-) True G437710
TU495610 lncRNA upstream 73598 73605794 ~ 73606475 (-) True G437713
XM_021604258.2 mRNA downstream 87094 73431563 ~ 73444514 (-) True LOC110524527
XM_036978341.1 mRNA downstream 109925 73370439 ~ 73421683 (-) False LOC110524526
XM_036978340.1 mRNA downstream 109926 73370439 ~ 73421682 (-) False LOC110524526
XM_036978342.1 mRNA downstream 112304 73370439 ~ 73419304 (-) False LOC110524526
XM_021604256.2 mRNA downstream 313450 73207860 ~ 73218158 (-) True LOC100135942
XM_021604266.2 mRNA upstream 25177 73557373 ~ 73574822 (-) True LOC110524532
XM_021604281.2 mRNA upstream 47703 73579899 ~ 73583095 (-) False LOC110524534
XM_036978348.1 mRNA upstream 48454 73580650 ~ 73583099 (-) True LOC110524534
XM_036978360.1 mRNA upstream 159660 73691856 ~ 73720855 (-) False palld
XM_036978359.1 mRNA upstream 159660 73691856 ~ 73720862 (-) False palld
TU495056 other downstream 121269 73370608 ~ 73410339 (-) True LOC110524526
TU494857 other downstream 384480 73146358 ~ 73147128 (-) False G437079
TU494858 other downstream 384480 73146358 ~ 73147128 (-) False G437079
TU494859 other downstream 384480 73146358 ~ 73147128 (-) True G437079
TU494844 other downstream 406570 73122112 ~ 73125038 (-) True G437074
TU497050 other upstream 1333063 74865259 ~ 74927797 (-) True G439002
TU497119 other upstream 1431264 74963460 ~ 74963696 (-) True LOC110523004
TU497719 other upstream 1731277 75263473 ~ 75265403 (-) True G439594
TU497923 other upstream 2039053 75571249 ~ 75575569 (-) True G439788
TU499371 other upstream 3054262 76586458 ~ 76590370 (-) True G441168

Expression Profile