RNA id: TU495862



Basic Information


Item Value
RNA id TU495862
length 353
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G437933
representative True

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 74032244 ~ 74032596 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


TTAATATAGCCAATTAATTCATACATTTTGCTTGTTTTATAAGGCCAACATGAAGTGCTCATTGTAGTACttttgtgtgtatcagtgtgtaaatgtgtgtgtgtctgcgtattTGAGAGAAAGCTAGAGTGTGCAACTGAGTCAGTATAAGATCTTTAGCAGCTGCTCCATAGAGTATTTTGTTTTAGCATTAGATCAGGGGCTCAGAGAGGGCAAACCACAGCTTTGAAAGACTTTCTATCTATTGAATGGGACATGGCGTGTTACACATGCCCCCAGTGAGGCCACAGTTACTCCATCGCTCAGATCCACACATACTCCCTACGACAAACATCAGACTCCCAgatgttccc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU495858 lncRNA downstream 8601 74023431 ~ 74023643 (-) True G437929
TU495855 lncRNA downstream 10703 74021333 ~ 74021541 (-) True G437926
TU495853 lncRNA downstream 13072 74018971 ~ 74019172 (-) True G437924
TU495793 lncRNA downstream 184524 73844674 ~ 73847720 (-) False LOC118964642
TU495863 lncRNA upstream 1707 74034303 ~ 74034613 (-) True G437934
TU495875 lncRNA upstream 22405 74055001 ~ 74059582 (-) True G437945
TU495884 lncRNA upstream 34530 74067126 ~ 74067497 (-) True G437952
TU495885 lncRNA upstream 35356 74067952 ~ 74068427 (-) True G437953
TU495886 lncRNA upstream 36939 74069535 ~ 74069879 (-) True G437954
XM_021604322.2 mRNA downstream 16206 74009042 ~ 74016038 (-) True sgcb
XM_021604321.2 mRNA downstream 23675 73993983 ~ 74008569 (-) True LOC110524549
XM_021604320.2 mRNA downstream 60114 73969591 ~ 73972130 (-) True ociad2
XM_036978371.1 mRNA downstream 78367 73850914 ~ 73953877 (-) True fryl
XM_036978372.1 mRNA downstream 78368 73850914 ~ 73953876 (-) False fryl
XM_036979058.1 mRNA upstream 29632 74062228 ~ 74075591 (-) True LOC110523002
XM_036978386.1 mRNA upstream 89707 74122303 ~ 74354093 (-) False LOC110524553
XM_036978387.1 mRNA upstream 89730 74122326 ~ 74354093 (-) True LOC110524553
XM_036978393.1 mRNA upstream 373250 74405846 ~ 74472255 (-) False LOC110524556
XM_036978392.1 mRNA upstream 373250 74405846 ~ 74499160 (-) False LOC110524556
TU495056 other downstream 621905 73370608 ~ 73410339 (-) True LOC110524526
TU494857 other downstream 885116 73146358 ~ 73147128 (-) False G437079
TU494858 other downstream 885116 73146358 ~ 73147128 (-) False G437079
TU494859 other downstream 885116 73146358 ~ 73147128 (-) True G437079
TU494844 other downstream 907206 73122112 ~ 73125038 (-) True G437074
TU497050 other upstream 832663 74865259 ~ 74927797 (-) True G439002
TU497119 other upstream 930864 74963460 ~ 74963696 (-) True LOC110523004
TU497719 other upstream 1230877 75263473 ~ 75265403 (-) True G439594
TU497923 other upstream 1538653 75571249 ~ 75575569 (-) True G439788
TU499371 other upstream 2553862 76586458 ~ 76590370 (-) True G441168

Expression Profile