RNA id: TU499155



Basic Information


Item Value
RNA id TU499155
length 203
lncRNA type inter_gene
GC content 0.46
exon number 1
gene id G440965
representative True

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 76478824 ~ 76479026 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ggggagcaacttctcccaaccatccaggaacagttttgcCATAAAGCAAAAGTGTTacctaagtggctcggggaacaaaacatcaatattttaggtccatgaccaggaaactccccagaccttaatcccattgagaacttgtggtcaatcctcaagaggcgggtggacaaacaaaaacccacaaattctgacaaactccaagc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU499140 lncRNA downstream 9863 76468712 ~ 76468961 (-) True G440950
TU499088 lncRNA downstream 47374 76431099 ~ 76431450 (-) True G440899
TU498604 lncRNA downstream 136410 76324920 ~ 76342414 (-) True G440430
TU498599 lncRNA downstream 598870 75879642 ~ 75879954 (-) True G440427
TU498233 lncRNA downstream 617981 75860620 ~ 75860843 (-) True G440081
TU499387 lncRNA upstream 84679 76563705 ~ 76566462 (-) True G441179
TU499399 lncRNA upstream 118316 76597342 ~ 76608244 (-) True G441190
TU499471 lncRNA upstream 218286 76697312 ~ 76697574 (-) True G441254
TU499448 lncRNA upstream 225618 76704644 ~ 76707910 (-) True G441231
TU499486 lncRNA upstream 250454 76729480 ~ 76729680 (-) True G441268
XM_036978426.1 mRNA downstream 153956 76288921 ~ 76324868 (-) True LOC110524583
XM_021604384.2 mRNA downstream 160169 76288921 ~ 76318655 (-) False LOC110524583
XM_036978427.1 mRNA downstream 160206 76288921 ~ 76318618 (-) False LOC110524583
XM_021604383.2 mRNA downstream 524335 75882229 ~ 75954489 (-) True LOC110524582
XM_021601424.2 mRNA downstream 735115 75740110 ~ 75743709 (-) True LOC110523006
XM_021604392.2 mRNA upstream 99217 76578243 ~ 76584083 (-) False LOC110524587
XM_021604391.2 mRNA upstream 99223 76578249 ~ 76586678 (-) True LOC110524587
XM_021604394.2 mRNA upstream 107979 76587005 ~ 76588448 (-) False glrx2
XM_021604398.2 mRNA upstream 107979 76587005 ~ 76588861 (-) False glrx2
XM_021604395.2 mRNA upstream 107979 76587005 ~ 76588907 (-) False glrx2
TU497923 other downstream 903255 75571249 ~ 75575569 (-) True G439788
TU497719 other downstream 1213421 75263473 ~ 75265403 (-) True G439594
TU497119 other downstream 1515128 74963460 ~ 74963696 (-) True LOC110523004
TU497050 other downstream 1551027 74865259 ~ 74927797 (-) True G439002
TU495056 other downstream 3068485 73370608 ~ 73410339 (-) True LOC110524526
TU499371 other upstream 107432 76586458 ~ 76590370 (-) True G441168
TU499702 other upstream 423356 76902382 ~ 76902771 (-) True G441483
TU499853 other upstream 534973 77013999 ~ 77021375 (-) True G441630
TU500354 other upstream 927716 77406742 ~ 77407135 (-) True G442115
TU500657 other upstream 1144273 77623299 ~ 77627214 (-) False G442381

Expression Profile