RNA id: TU504783



Basic Information


Item Value
RNA id TU504783
length 227
lncRNA type inter_gene
GC content 0.48
exon number 1
gene id G446103
representative True

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 81328952 ~ 81329178 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


GTTTGCAAAAATTCACATGAAAGCGTAAGGCCAAAGcctctgtggtctgatgagacaaaaagtgaactatttggcctgaatgcaaagtgctatgtctggagacaaccaggcacagctcatcacccatctaacaccatccctactgtgaagcatggttgtggcagcatcatgctatggggatgcttttcagtggcagggactgggagactggtaagaatagagggaac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU504777 lncRNA downstream 6937 81321731 ~ 81322015 (-) True G446097
TU504766 lncRNA downstream 21563 81307049 ~ 81307389 (-) True G446086
TU504762 lncRNA downstream 30706 81298037 ~ 81298246 (-) True G446082
TU504754 lncRNA downstream 40130 81288550 ~ 81288822 (-) True G446074
TU504750 lncRNA downstream 46782 81281789 ~ 81282170 (-) True G446070
TU504795 lncRNA upstream 8372 81337550 ~ 81338668 (-) True G446112
TU504805 lncRNA upstream 14617 81343795 ~ 81344264 (-) True G446120
TU504811 lncRNA upstream 20593 81349771 ~ 81350033 (-) True G446126
TU504813 lncRNA upstream 21762 81350940 ~ 81351294 (-) True G446128
TU504814 lncRNA upstream 23156 81352334 ~ 81352578 (-) True G446129
XM_021604506.2 mRNA downstream 49759 81277266 ~ 81279193 (-) True LOC110524661
XM_021604505.2 mRNA downstream 57896 81265457 ~ 81271056 (-) True LOC110524660
XM_021604504.2 mRNA downstream 88768 81237982 ~ 81240184 (-) True LOC110524659
XM_036978531.1 mRNA downstream 467587 80839898 ~ 80861365 (-) True serpinb1
XM_036978534.1 mRNA downstream 467626 80839898 ~ 80861326 (-) False serpinb1
XM_036978543.1 mRNA upstream 251140 81580318 ~ 81589232 (-) True LOC110524663
XM_021604511.2 mRNA upstream 305185 81634363 ~ 81637591 (-) True LOC110524664
XM_036978544.1 mRNA upstream 310284 81639462 ~ 81767595 (-) False LOC110524665
XM_036978545.1 mRNA upstream 310284 81639462 ~ 81767595 (-) False LOC110524665
XM_036978546.1 mRNA upstream 310284 81639462 ~ 81767595 (-) True LOC110524665
TU503818 other downstream 1067447 80245943 ~ 80261505 (-) True G445220
TU503806 other downstream 1102751 80225475 ~ 80226201 (-) True LOC118964653
TU503794 other downstream 1151872 80176762 ~ 80177080 (-) True G445197
TU503706 other downstream 1341248 79982461 ~ 79987704 (-) False G445115
TU503246 other downstream 1597416 79730987 ~ 79731536 (-) True G444691
TU505560 other upstream 614107 81943285 ~ 81943611 (-) True G446775
TU506105 other upstream 1061477 82390655 ~ 82391224 (-) True G447220
TU507016 other upstream 1988335 83317513 ~ 83319715 (-) False G447993
TU507017 other upstream 1989458 83318636 ~ 83319715 (-) True G447993
TU507137 other upstream 2181175 83510353 ~ 83520273 (-) True G448079

Expression Profile