RNA id: TU507017


Basic Information

Item Value
RNA id TU507017
length 606
RNA type TUCP
GC content 0.33
exon number 2
gene id G447993
representative True

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 83315161 ~ 83319715 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

actactactactactactactactactactactactactactaattatactactactactactgatactactactactactactaatgttacgACTACTAattctactaatactactactgatactactactactactactactactactactactaattatactactactactactgatactactactactactagtaatgttactactactaattctactaatactactactgatactactactactactactactactactactactactactactgatactactactactactactactactactactactactactaccactactactactacaactactaattctactactactactactgatactactactactactactactaccactactactactactactactactaattattctactacttctactattaccactactactactacactactaccactactaccactactacactactgccactactactactacactactactactaaactactactactacactactactacactactactactactacactactacttctactaccactactacactactactactactac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU507018 lncRNA downstream 2463 83315161 ~ 83316173 (-) False G447993
TU507011 lncRNA downstream 14101 83304164 ~ 83304535 (-) True G447988
TU506949 lncRNA downstream 74838 83241207 ~ 83243798 (-) False adcyap1r1b
TU506950 lncRNA downstream 74838 83241207 ~ 83243798 (-) True adcyap1r1b
TU506982 lncRNA downstream 83044 83234324 ~ 83235592 (-) True G447960
TU507030 lncRNA upstream 12450 83332165 ~ 83332801 (-) True G448003
TU507040 lncRNA upstream 67748 83387463 ~ 83402528 (-) True G448012
TU507088 lncRNA upstream 113142 83432857 ~ 83433228 (-) True G448055
TU507095 lncRNA upstream 143651 83463366 ~ 83463611 (-) True G448062
TU507127 lncRNA upstream 146486 83466201 ~ 83517728 (-) False G448071
XM_036976501.1 mRNA downstream 12394 83250984 ~ 83306242 (-) False adcyap1r1b
NM_001124641.1 mRNA downstream 12433 83241207 ~ 83306203 (-) False adcyap1r1b
XM_036978561.1 mRNA downstream 221573 82981449 ~ 83097063 (-) False LOC110524678
XM_036978563.1 mRNA downstream 221573 82981449 ~ 83097063 (-) True LOC110524678
XM_036978560.1 mRNA downstream 344047 82966984 ~ 82974589 (-) True LOC110524677
XM_021604537.2 mRNA upstream 265021 83584736 ~ 83599713 (-) False LOC110524681
XM_036978568.1 mRNA upstream 265021 83584736 ~ 83599722 (-) True LOC110524681
XM_021604538.2 mRNA upstream 315592 83635307 ~ 83661963 (-) True LOC110524682
LOC110523023 mRNA upstream 479101 83798816 ~ 83800505 (-) True LOC110523023
XM_021604541.2 mRNA upstream 484585 83804300 ~ 83825419 (-) False LOC110524685
TU506105 other downstream 927412 82390655 ~ 82391224 (-) True G447220
TU505560 other downstream 1375025 81943285 ~ 81943611 (-) True G446775
TU503818 other downstream 3057131 80245943 ~ 80261505 (-) True G445220
TU503806 other downstream 3092435 80225475 ~ 80226201 (-) True LOC118964653
TU503794 other downstream 3141556 80176762 ~ 80177080 (-) True G445197
TU507137 other upstream 190638 83510353 ~ 83520273 (-) True G448079
TU507522 other upstream 551887 83871602 ~ 83873308 (-) True G448411
TU507563 other upstream 596421 83916136 ~ 83916641 (-) True G448452
TU510077 other upstream 2023073 85342788 ~ 85343072 (-) True G450676
TU510133 other upstream 2125966 85445681 ~ 85471880 (-) False lurap1

Expression Profile