RNA id: TU507324


Basic Information

Item Value
RNA id TU507324
length 257
lncRNA type inter_gene
GC content 0.44
exon number 1
gene id G448252
representative True

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 83698050 ~ 83698306 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

aaagtgcagagagcatcatgaagaacaaggaacacaccaggcaggtccgagatactgttgtgaagaagtttaaagccggatttggatacaaaatatttcccaagctttaaacatcccaaggagcactgtgcaagcgataatattgaaatggaaggagtatcagaccactgcaaatctaccaagacctggccgtccctctaaactttcagcttatacaaggagaagactgatcagagatgtagccaagaggcccatga

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU507314 lncRNA downstream 10881 83686932 ~ 83687169 (-) True G448242
TU507279 lncRNA downstream 49270 83642359 ~ 83648780 (-) False G448210
TU507280 lncRNA downstream 49270 83642359 ~ 83648780 (-) False G448210
TU507282 lncRNA downstream 49270 83642359 ~ 83648780 (-) True G448210
TU507278 lncRNA downstream 51879 83642359 ~ 83646171 (-) False G448210
TU507344 lncRNA upstream 29166 83727472 ~ 83727983 (-) True G448272
TU507366 lncRNA upstream 63475 83761781 ~ 83769470 (-) True G448289
TU507373 lncRNA upstream 73641 83771947 ~ 83772719 (-) True G448296
TU507379 lncRNA upstream 78700 83777006 ~ 83777219 (-) True G448302
TU507478 lncRNA upstream 151396 83849702 ~ 83855550 (-) False G448378
XM_021604538.2 mRNA downstream 36087 83635307 ~ 83661963 (-) True LOC110524682
XM_036978568.1 mRNA downstream 98328 83584736 ~ 83599722 (-) True LOC110524681
XM_021604537.2 mRNA downstream 98337 83584736 ~ 83599713 (-) False LOC110524681
XM_036976501.1 mRNA downstream 391808 83250984 ~ 83306242 (-) False adcyap1r1b
NM_001124641.1 mRNA downstream 391847 83241207 ~ 83306203 (-) False adcyap1r1b
LOC110523023 mRNA upstream 100510 83798816 ~ 83800505 (-) True LOC110523023
XM_021604541.2 mRNA upstream 105994 83804300 ~ 83825419 (-) False LOC110524685
XM_021604543.2 mRNA upstream 105994 83804300 ~ 83825419 (-) False LOC110524685
XM_021604544.2 mRNA upstream 105994 83804300 ~ 83825419 (-) False LOC110524685
XM_021604545.2 mRNA upstream 105994 83804300 ~ 83825419 (-) False LOC110524685
TU507137 other downstream 177777 83510353 ~ 83520273 (-) True G448079
TU507016 other downstream 378335 83317513 ~ 83319715 (-) False G447993
TU507017 other downstream 378335 83318636 ~ 83319715 (-) True G447993
TU506105 other downstream 1306826 82390655 ~ 82391224 (-) True G447220
TU505560 other downstream 1754439 81943285 ~ 81943611 (-) True G446775
TU507522 other upstream 173296 83871602 ~ 83873308 (-) True G448411
TU507563 other upstream 217830 83916136 ~ 83916641 (-) True G448452
TU510077 other upstream 1644482 85342788 ~ 85343072 (-) True G450676
TU510133 other upstream 1747375 85445681 ~ 85471880 (-) False lurap1
TU510180 other upstream 1788536 85486842 ~ 85487158 (-) True G450752

Expression Profile