Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU509631 |
| length | 555 |
| lncRNA type | intronic |
| GC content | 0.55 |
| exon number | 2 |
| gene id | G450273 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 86319185 ~ 86321493 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU509609 | lncRNA | upstream | 58353 | 86259980 ~ 86261531 (+) | True | LOC110524728 |
| TU509532 | lncRNA | upstream | 101449 | 86202169 ~ 86218435 (+) | True | G450214 |
| TU509516 | lncRNA | upstream | 129405 | 86161421 ~ 86190479 (+) | False | G450199 |
| TU509515 | lncRNA | upstream | 129405 | 86187396 ~ 86190479 (+) | True | G450199 |
| TU509493 | lncRNA | upstream | 187526 | 86132077 ~ 86132358 (+) | True | G450181 |
| TU509585 | lncRNA | downstream | 27862 | 86349355 ~ 86352935 (+) | True | G450237 |
| TU509652 | lncRNA | downstream | 59401 | 86380894 ~ 86385760 (+) | True | G450293 |
| TU509656 | lncRNA | downstream | 74270 | 86395763 ~ 86395994 (+) | True | G450297 |
| TU509663 | lncRNA | downstream | 80863 | 86402356 ~ 86402691 (+) | True | G450304 |
| TU509667 | lncRNA | downstream | 84229 | 86405722 ~ 86405947 (+) | True | G450308 |
| XR_002473637.2 | mRNA | upstream | 57732 | 86260102 ~ 86262152 (+) | False | LOC110524728 |
| XR_005051946.1 | mRNA | upstream | 93939 | 86225891 ~ 86225945 (+) | True | LOC118964753 |
| XR_005051882.1 | mRNA | upstream | 660976 | 85656730 ~ 85658908 (+) | False | LOC118964678 |
| XM_036978611.1 | mRNA | upstream | 793934 | 85516465 ~ 85525950 (+) | False | dnai4 |
| XR_005051884.1 | mRNA | downstream | 43246 | 86364739 ~ 86368940 (+) | True | LOC118964680 |
| XM_021604623.2 | mRNA | downstream | 772541 | 87094034 ~ 87103631 (+) | False | si:dkey-148h10.5 |
| XR_002473639.2 | mRNA | downstream | 772547 | 87094040 ~ 87107836 (+) | False | si:dkey-148h10.5 |
| XM_036978633.1 | mRNA | downstream | 772553 | 87094046 ~ 87099179 (+) | False | si:dkey-148h10.5 |
| XM_021604626.2 | mRNA | downstream | 772553 | 87094046 ~ 87103625 (+) | False | si:dkey-148h10.5 |
| TU509067 | other | upstream | 872309 | 85445964 ~ 85447575 (+) | False | G449809 |
| TU509068 | other | upstream | 872309 | 85445964 ~ 85447575 (+) | True | G449809 |
| TU509026 | other | upstream | 990942 | 85328572 ~ 85328942 (+) | True | G449774 |
| TU507801 | other | upstream | 1930283 | 84388093 ~ 84389601 (+) | False | LOC118964674 |
| TU507838 | other | upstream | 2017411 | 84302100 ~ 84302473 (+) | True | G448698 |
| TU509709 | other | downstream | 147045 | 86468538 ~ 86468937 (+) | True | G450333 |
| TU509699 | other | downstream | 232980 | 86554473 ~ 86556047 (+) | False | G450331 |
| TU509700 | other | downstream | 233435 | 86554928 ~ 86556047 (+) | False | G450331 |
| TU509774 | other | downstream | 274654 | 86596147 ~ 86596515 (+) | True | G450394 |
| TU510894 | other | downstream | 522383 | 86843876 ~ 86844271 (+) | True | G451408 |
