Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU511182 |
| length | 247 |
| lncRNA type | intronic |
| GC content | 0.39 |
| exon number | 2 |
| gene id | G451677 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 86999152 ~ 87002397 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU511165 | lncRNA | downstream | 22606 | 86975159 ~ 86976546 (-) | True | G451662 |
| TU511157 | lncRNA | downstream | 32631 | 86962194 ~ 86966521 (-) | True | G451656 |
| TU511158 | lncRNA | downstream | 33072 | 86962461 ~ 86966080 (-) | False | G451657 |
| TU511159 | lncRNA | downstream | 33072 | 86962461 ~ 86966080 (-) | True | G451657 |
| TU511119 | lncRNA | downstream | 113707 | 86884076 ~ 86885445 (-) | True | G451618 |
| TU511213 | lncRNA | upstream | 38422 | 87040819 ~ 87095013 (-) | True | G451706 |
| TU511208 | lncRNA | upstream | 69488 | 87071885 ~ 87074708 (-) | True | efcab7 |
| TU511249 | lncRNA | upstream | 128620 | 87131017 ~ 87133651 (-) | True | G451740 |
| TU511253 | lncRNA | upstream | 136050 | 87138447 ~ 87140841 (-) | True | G451742 |
| TU511255 | lncRNA | upstream | 136198 | 87138595 ~ 87142509 (-) | False | G451743 |
| XM_036978627.1 | mRNA | downstream | 286710 | 86558266 ~ 86712442 (-) | False | cachd1 |
| XM_036978626.1 | mRNA | downstream | 286711 | 86556730 ~ 86712441 (-) | False | cachd1 |
| XM_036978623.1 | mRNA | downstream | 451940 | 86351342 ~ 86547212 (-) | False | raver2 |
| XM_036978624.1 | mRNA | downstream | 451940 | 86351342 ~ 86547212 (-) | True | raver2 |
| XM_021604612.2 | mRNA | downstream | 738964 | 86253504 ~ 86260188 (-) | True | ak4 |
| XM_036978629.1 | mRNA | upstream | 52637 | 87055034 ~ 87067699 (-) | True | pgm1 |
| XM_021604620.2 | mRNA | upstream | 69434 | 87071831 ~ 87093894 (-) | False | efcab7 |
| XM_021604621.2 | mRNA | upstream | 105603 | 87108000 ~ 87144341 (-) | False | alg6 |
| XM_036978630.1 | mRNA | upstream | 105603 | 87108000 ~ 87144341 (-) | True | alg6 |
| XM_021604627.2 | mRNA | upstream | 149428 | 87151825 ~ 87153819 (-) | True | foxd3 |
| TU511053 | other | downstream | 233165 | 86765583 ~ 86765987 (-) | True | ror1 |
| TU510765 | other | downstream | 401408 | 86597352 ~ 86597744 (-) | True | G451286 |
| TU510750 | other | downstream | 449274 | 86548838 ~ 86549878 (-) | True | G451271 |
| TU510403 | other | downstream | 1120178 | 85877733 ~ 85878974 (-) | True | G450957 |
| TU510180 | other | downstream | 1511994 | 85486842 ~ 85487158 (-) | True | G450752 |
| TU511399 | other | upstream | 239457 | 87241854 ~ 87243233 (-) | True | G451856 |
| TU511933 | other | upstream | 495969 | 87498366 ~ 87499136 (-) | True | G452255 |
| TU512060 | other | upstream | 771825 | 87774222 ~ 87805865 (-) | True | LOC110523029 |
| TU512143 | other | upstream | 857730 | 87860127 ~ 87866464 (-) | True | G452442 |
| TU512158 | other | upstream | 892335 | 87894732 ~ 87895212 (-) | True | G452457 |
