Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU511254 |
| length | 234 |
| lncRNA type | intronic |
| GC content | 0.33 |
| exon number | 2 |
| gene id | G451743 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 87138595 ~ 87142676 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU511253 | lncRNA | downstream | 1378 | 87138447 ~ 87140841 (-) | True | G451742 |
| TU511249 | lncRNA | downstream | 8568 | 87131017 ~ 87133651 (-) | True | G451740 |
| TU511213 | lncRNA | downstream | 47206 | 87040819 ~ 87095013 (-) | True | G451706 |
| TU511208 | lncRNA | downstream | 67511 | 87071885 ~ 87074708 (-) | True | efcab7 |
| TU511182 | lncRNA | downstream | 139822 | 86999152 ~ 87002397 (-) | True | G451677 |
| TU511427 | lncRNA | upstream | 105929 | 87248605 ~ 87248829 (-) | True | G451860 |
| TU511430 | lncRNA | upstream | 125271 | 87267947 ~ 87268208 (-) | True | G451863 |
| TU511458 | lncRNA | upstream | 154180 | 87296856 ~ 87299127 (-) | True | G451890 |
| TU511503 | lncRNA | upstream | 240210 | 87382886 ~ 87383098 (-) | True | G451935 |
| TU511504 | lncRNA | upstream | 240578 | 87383254 ~ 87383483 (-) | True | G451936 |
| XM_021604620.2 | mRNA | downstream | 48325 | 87071831 ~ 87093894 (-) | False | efcab7 |
| XM_036978629.1 | mRNA | downstream | 74520 | 87055034 ~ 87067699 (-) | True | pgm1 |
| XM_036978628.1 | mRNA | downstream | 99085 | 86763372 ~ 87043134 (-) | False | ror1 |
| XM_036978627.1 | mRNA | downstream | 429777 | 86558266 ~ 86712442 (-) | False | cachd1 |
| XM_036978626.1 | mRNA | downstream | 429778 | 86556730 ~ 86712441 (-) | False | cachd1 |
| XM_021604627.2 | mRNA | upstream | 9149 | 87151825 ~ 87153819 (-) | True | foxd3 |
| XM_021604628.2 | mRNA | upstream | 248985 | 87391661 ~ 87401413 (-) | True | atg4c |
| XM_021604639.2 | mRNA | upstream | 276554 | 87419230 ~ 87424068 (-) | True | angptl3 |
| XM_021603307.2 | mRNA | upstream | 363073 | 87505749 ~ 87520049 (-) | False | usp1 |
| XM_021603308.2 | mRNA | upstream | 363073 | 87505749 ~ 87520050 (-) | True | usp1 |
| TU511053 | other | downstream | 376232 | 86765583 ~ 86765987 (-) | True | ror1 |
| TU510765 | other | downstream | 544475 | 86597352 ~ 86597744 (-) | True | G451286 |
| TU510750 | other | downstream | 592341 | 86548838 ~ 86549878 (-) | True | G451271 |
| TU510403 | other | downstream | 1263245 | 85877733 ~ 85878974 (-) | True | G450957 |
| TU510180 | other | downstream | 1655061 | 85486842 ~ 85487158 (-) | True | G450752 |
| TU511399 | other | upstream | 99178 | 87241854 ~ 87243233 (-) | True | G451856 |
| TU511933 | other | upstream | 355690 | 87498366 ~ 87499136 (-) | True | G452255 |
| TU512060 | other | upstream | 631546 | 87774222 ~ 87805865 (-) | True | LOC110523029 |
| TU512143 | other | upstream | 717451 | 87860127 ~ 87866464 (-) | True | G452442 |
| TU512158 | other | upstream | 752056 | 87894732 ~ 87895212 (-) | True | G452457 |
