Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU511458 |
| length | 202 |
| lncRNA type | inter_gene |
| GC content | 0.34 |
| exon number | 2 |
| gene id | G451890 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 87296856 ~ 87299127 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU511430 | lncRNA | downstream | 28648 | 87267947 ~ 87268208 (-) | True | G451863 |
| TU511427 | lncRNA | downstream | 48027 | 87248605 ~ 87248829 (-) | True | G451860 |
| TU511254 | lncRNA | downstream | 154180 | 87142219 ~ 87142676 (-) | True | G451743 |
| TU511255 | lncRNA | downstream | 154347 | 87138595 ~ 87142509 (-) | False | G451743 |
| TU511253 | lncRNA | downstream | 156015 | 87138447 ~ 87140841 (-) | True | G451742 |
| TU511503 | lncRNA | upstream | 83759 | 87382886 ~ 87383098 (-) | True | G451935 |
| TU511504 | lncRNA | upstream | 84127 | 87383254 ~ 87383483 (-) | True | G451936 |
| TU511508 | lncRNA | upstream | 89142 | 87388269 ~ 87388539 (-) | True | G451940 |
| TU511954 | lncRNA | upstream | 167777 | 87466904 ~ 87467595 (-) | True | G452274 |
| TU511926 | lncRNA | upstream | 194009 | 87493136 ~ 87493960 (-) | True | G452248 |
| XM_021604627.2 | mRNA | downstream | 143037 | 87151825 ~ 87153819 (-) | True | foxd3 |
| XM_021604621.2 | mRNA | downstream | 152515 | 87108000 ~ 87144341 (-) | False | alg6 |
| XM_036978630.1 | mRNA | downstream | 152515 | 87108000 ~ 87144341 (-) | True | alg6 |
| XM_021604620.2 | mRNA | downstream | 202962 | 87071831 ~ 87093894 (-) | False | efcab7 |
| XM_036978629.1 | mRNA | downstream | 229157 | 87055034 ~ 87067699 (-) | True | pgm1 |
| XM_021604628.2 | mRNA | upstream | 92534 | 87391661 ~ 87401413 (-) | True | atg4c |
| XM_021604639.2 | mRNA | upstream | 120103 | 87419230 ~ 87424068 (-) | True | angptl3 |
| XM_021603307.2 | mRNA | upstream | 206622 | 87505749 ~ 87520049 (-) | False | usp1 |
| XM_021603308.2 | mRNA | upstream | 206622 | 87505749 ~ 87520050 (-) | True | usp1 |
| XR_005051885.1 | mRNA | upstream | 358802 | 87657929 ~ 87659520 (-) | True | LOC110522895 |
| TU511399 | other | downstream | 53623 | 87241854 ~ 87243233 (-) | True | G451856 |
| TU511053 | other | downstream | 530869 | 86765583 ~ 86765987 (-) | True | ror1 |
| TU510765 | other | downstream | 699112 | 86597352 ~ 86597744 (-) | True | G451286 |
| TU510750 | other | downstream | 746978 | 86548838 ~ 86549878 (-) | True | G451271 |
| TU510403 | other | downstream | 1417882 | 85877733 ~ 85878974 (-) | True | G450957 |
| TU511933 | other | upstream | 199239 | 87498366 ~ 87499136 (-) | True | G452255 |
| TU512060 | other | upstream | 475095 | 87774222 ~ 87805865 (-) | True | LOC110523029 |
| TU512143 | other | upstream | 561000 | 87860127 ~ 87866464 (-) | True | G452442 |
| TU512158 | other | upstream | 595605 | 87894732 ~ 87895212 (-) | True | G452457 |
| TU512205 | other | upstream | 684833 | 87983960 ~ 87984633 (-) | True | G452504 |
