Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU512225 |
| length | 343 |
| lncRNA type | intronic |
| GC content | 0.49 |
| exon number | 1 |
| gene id | G452524 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 88015499 ~ 88015841 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU512224 | lncRNA | downstream | 309 | 88014966 ~ 88015190 (-) | True | G452523 |
| TU512223 | lncRNA | downstream | 1478 | 88013768 ~ 88014021 (-) | True | G452522 |
| TU512212 | lncRNA | downstream | 18708 | 87996572 ~ 87996791 (-) | True | G452511 |
| TU512204 | lncRNA | downstream | 31669 | 87983583 ~ 87983830 (-) | True | G452503 |
| TU512203 | lncRNA | downstream | 32199 | 87982968 ~ 87983300 (-) | True | G452502 |
| TU512226 | lncRNA | upstream | 248 | 88016089 ~ 88016374 (-) | True | G452525 |
| TU512243 | lncRNA | upstream | 22310 | 88038151 ~ 88038351 (-) | True | G452538 |
| TU512245 | lncRNA | upstream | 23847 | 88039688 ~ 88039913 (-) | True | G452540 |
| TU512248 | lncRNA | upstream | 25994 | 88041835 ~ 88042110 (-) | True | G452543 |
| TU512256 | lncRNA | upstream | 34854 | 88050695 ~ 88050959 (-) | True | G452551 |
| XR_005051885.1 | mRNA | downstream | 355979 | 87657929 ~ 87659520 (-) | True | LOC110522895 |
| XM_021603308.2 | mRNA | downstream | 495449 | 87505749 ~ 87520050 (-) | True | usp1 |
| XM_021603307.2 | mRNA | downstream | 495450 | 87505749 ~ 87520049 (-) | False | usp1 |
| XM_021604639.2 | mRNA | downstream | 591431 | 87419230 ~ 87424068 (-) | True | angptl3 |
| XM_021604628.2 | mRNA | downstream | 614086 | 87391661 ~ 87401413 (-) | True | atg4c |
| XM_021604649.2 | mRNA | upstream | 246734 | 88262575 ~ 88268140 (-) | False | LOC110524751 |
| XR_002473645.2 | mRNA | upstream | 246734 | 88262575 ~ 88268140 (-) | True | LOC110524751 |
| XM_036978661.1 | mRNA | upstream | 290087 | 88305928 ~ 88345287 (-) | False | ap1m3 |
| XM_036978660.1 | mRNA | upstream | 290087 | 88305928 ~ 88348088 (-) | True | ap1m3 |
| XM_036978662.1 | mRNA | upstream | 332492 | 88348333 ~ 88355068 (-) | True | c5h1orf210 |
| TU512218 | other | downstream | 8912 | 88005919 ~ 88006587 (-) | True | G452517 |
| TU512205 | other | downstream | 30866 | 87983960 ~ 87984633 (-) | True | G452504 |
| TU512158 | other | downstream | 120287 | 87894732 ~ 87895212 (-) | True | G452457 |
| TU512143 | other | downstream | 149035 | 87860127 ~ 87866464 (-) | True | G452442 |
| TU512060 | other | downstream | 209634 | 87774222 ~ 87805865 (-) | True | LOC110523029 |
| TU512280 | other | upstream | 58753 | 88074594 ~ 88075005 (-) | True | G452575 |
| TU512830 | other | upstream | 579610 | 88595451 ~ 88596395 (-) | True | G452999 |
| TU513651 | other | upstream | 1135899 | 89151740 ~ 89154263 (-) | False | mast2 |
| TU513653 | other | upstream | 1135899 | 89151740 ~ 89154263 (-) | False | mast2 |
| TU513654 | other | upstream | 1135899 | 89151740 ~ 89154263 (-) | False | mast2 |
