Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU512245 |
| length | 226 |
| lncRNA type | intronic |
| GC content | 0.58 |
| exon number | 1 |
| gene id | G452540 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 88039688 ~ 88039913 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU512243 | lncRNA | downstream | 1337 | 88038151 ~ 88038351 (-) | True | G452538 |
| TU512226 | lncRNA | downstream | 23314 | 88016089 ~ 88016374 (-) | True | G452525 |
| TU512225 | lncRNA | downstream | 23847 | 88015499 ~ 88015841 (-) | True | G452524 |
| TU512224 | lncRNA | downstream | 24498 | 88014966 ~ 88015190 (-) | True | G452523 |
| TU512223 | lncRNA | downstream | 25667 | 88013768 ~ 88014021 (-) | True | G452522 |
| TU512248 | lncRNA | upstream | 1922 | 88041835 ~ 88042110 (-) | True | G452543 |
| TU512256 | lncRNA | upstream | 10782 | 88050695 ~ 88050959 (-) | True | G452551 |
| TU512260 | lncRNA | upstream | 16221 | 88056134 ~ 88056352 (-) | True | G452555 |
| TU512261 | lncRNA | upstream | 16685 | 88056598 ~ 88056842 (-) | True | G452556 |
| TU512262 | lncRNA | upstream | 17463 | 88057376 ~ 88057645 (-) | True | G452557 |
| XR_005051885.1 | mRNA | downstream | 380168 | 87657929 ~ 87659520 (-) | True | LOC110522895 |
| XM_021603308.2 | mRNA | downstream | 519638 | 87505749 ~ 87520050 (-) | True | usp1 |
| XM_021603307.2 | mRNA | downstream | 519639 | 87505749 ~ 87520049 (-) | False | usp1 |
| XM_021604639.2 | mRNA | downstream | 615620 | 87419230 ~ 87424068 (-) | True | angptl3 |
| XM_021604628.2 | mRNA | downstream | 638275 | 87391661 ~ 87401413 (-) | True | atg4c |
| XM_021604649.2 | mRNA | upstream | 222662 | 88262575 ~ 88268140 (-) | False | LOC110524751 |
| XR_002473645.2 | mRNA | upstream | 222662 | 88262575 ~ 88268140 (-) | True | LOC110524751 |
| XM_036978661.1 | mRNA | upstream | 266015 | 88305928 ~ 88345287 (-) | False | ap1m3 |
| XM_036978660.1 | mRNA | upstream | 266015 | 88305928 ~ 88348088 (-) | True | ap1m3 |
| XM_036978662.1 | mRNA | upstream | 308420 | 88348333 ~ 88355068 (-) | True | c5h1orf210 |
| TU512218 | other | downstream | 33101 | 88005919 ~ 88006587 (-) | True | G452517 |
| TU512205 | other | downstream | 55055 | 87983960 ~ 87984633 (-) | True | G452504 |
| TU512158 | other | downstream | 144476 | 87894732 ~ 87895212 (-) | True | G452457 |
| TU512143 | other | downstream | 173224 | 87860127 ~ 87866464 (-) | True | G452442 |
| TU512060 | other | downstream | 233823 | 87774222 ~ 87805865 (-) | True | LOC110523029 |
| TU512280 | other | upstream | 34681 | 88074594 ~ 88075005 (-) | True | G452575 |
| TU512830 | other | upstream | 555538 | 88595451 ~ 88596395 (-) | True | G452999 |
| TU513651 | other | upstream | 1111827 | 89151740 ~ 89154263 (-) | False | mast2 |
| TU513653 | other | upstream | 1111827 | 89151740 ~ 89154263 (-) | False | mast2 |
| TU513654 | other | upstream | 1111827 | 89151740 ~ 89154263 (-) | False | mast2 |
