RNA id: TU514916



Basic Information


Item Value
RNA id TU514916
length 118
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G454826
representative True

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 90430354 ~ 90430471 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ctaagaattcggtatcattgaacgcgaagaacgaagaccgccgaaacatctataatgaaatgaatgaatgtcactctgaactatccactcTATccacgacagaaagagagagagagga

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU514914 lncRNA downstream 1122 90428796 ~ 90429232 (-) True G454824
TU514990 lncRNA downstream 15845 90414303 ~ 90414509 (-) True G454890
TU514980 lncRNA downstream 25284 90404833 ~ 90405070 (-) True G454881
TU514976 lncRNA downstream 32495 90397341 ~ 90397859 (-) True G454877
TU514973 lncRNA downstream 37393 90392667 ~ 90392961 (-) True G454874
TU514999 lncRNA upstream 11492 90441963 ~ 90442350 (-) True G454899
TU515009 lncRNA upstream 23235 90453706 ~ 90453956 (-) True G454909
TU515077 lncRNA upstream 125162 90555633 ~ 90555863 (-) True G454972
TU515079 lncRNA upstream 127304 90557775 ~ 90557982 (-) True G454974
TU515729 lncRNA upstream 325629 90756100 ~ 90779081 (-) True G455513
XM_036978744.1 mRNA downstream 46260 90364241 ~ 90384094 (-) True b3galt2
XM_036979079.1 mRNA downstream 95026 90332712 ~ 90335328 (-) True LOC118936343
XM_021604693.2 mRNA downstream 97421 90329828 ~ 90332933 (-) True LOC110524783
XM_021604687.2 mRNA downstream 168530 90211082 ~ 90261824 (-) False pla2g4ab
XM_021604685.2 mRNA downstream 168531 90211082 ~ 90261823 (-) False pla2g4ab
XM_036978750.1 mRNA upstream 388316 90818787 ~ 90902390 (-) False LOC110524787
XM_036978749.1 mRNA upstream 388316 90818787 ~ 90902393 (-) False LOC110524787
XM_036978752.1 mRNA upstream 388316 90818787 ~ 90902393 (-) False LOC110524787
XM_036978753.1 mRNA upstream 388316 90818787 ~ 90902394 (-) False LOC110524787
XM_036978751.1 mRNA upstream 388316 90818787 ~ 90902395 (-) False LOC110524787
TU514974 other downstream 34118 90395847 ~ 90396236 (-) True G454875
TU514643 other downstream 284041 90145825 ~ 90146313 (-) True G454579
TU514429 other downstream 618049 89809035 ~ 89812305 (-) True trmt1l
TU513891 other downstream 987977 89441584 ~ 89442377 (-) True G453915
TU513778 other downstream 1193746 89234916 ~ 89236608 (-) True G453823
TU515000 other upstream 12625 90443096 ~ 90443490 (-) True G454900
TU514982 other upstream 24210 90454681 ~ 90473614 (-) True G454882
TU515713 other upstream 455601 90886072 ~ 90902401 (-) True LOC110524787
TU515863 other upstream 626986 91057457 ~ 91060985 (-) True G455630
TU515828 other upstream 643525 91073996 ~ 91074763 (-) True G455600

Expression Profile