RNA id: TU518070



Basic Information


Item Value
RNA id TU518070
length 351
RNA type TUCP
GC content 0.36
exon number 2
gene id G457423
representative True

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 92574263 ~ 92574754 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


CCTCATGCTTTCATATGACAGACTCCGACTTCAATACAAAAACAACCTGCTACTGTTATTACTACTGTtgttactactgttgttattACCATGAccgctgttactactactgttactactactactactgttactactactactactactgttgttatTACCATGAccgctgttactactactgttactactactactactgttgttatTACCATGAccgctgttactactactgttactactactactgttactactactactactgttactactactactactactactactgttactactactactactgttactactactgttactactactactactgttactact

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU518055 lncRNA downstream 22105 92551688 ~ 92552278 (-) True G457415
TU518015 lncRNA downstream 69531 92504443 ~ 92504852 (-) True G457382
TU517932 lncRNA downstream 205025 92369034 ~ 92369358 (-) True G457309
TU517909 lncRNA downstream 226111 92343149 ~ 92348272 (-) True G457288
TU517864 lncRNA downstream 313074 92260606 ~ 92261309 (-) True G457246
TU518049 lncRNA upstream 23057 92597811 ~ 92598689 (-) False G457410
TU518050 lncRNA upstream 23057 92597811 ~ 92598223 (-) True G457410
TU518078 lncRNA upstream 34754 92609508 ~ 92610917 (-) True G457428
TU518084 lncRNA upstream 41018 92615772 ~ 92616321 (-) True G457432
TU518088 lncRNA upstream 48715 92623469 ~ 92624710 (-) False G457435
XM_021604721.2 mRNA downstream 529361 92005276 ~ 92045022 (-) False si:ch73-61d6.3
XM_036978790.1 mRNA downstream 593787 91978211 ~ 91980596 (-) False LOC110524808
XR_002473663.2 mRNA upstream 54848 92629602 ~ 92630894 (-) False LOC110524822
XM_036978829.1 mRNA upstream 62101 92636855 ~ 92642203 (-) False senp5
XM_036978827.1 mRNA upstream 62101 92636855 ~ 92642257 (-) False senp5
XM_036978831.1 mRNA upstream 62101 92636855 ~ 92642257 (-) False senp5
XM_036978828.1 mRNA upstream 62101 92636855 ~ 92642262 (-) False senp5
TU518066 other downstream 489 92571979 ~ 92573894 (-) False G457422
TU518067 other downstream 489 92571979 ~ 92573894 (-) True G457422
TU518021 other downstream 59999 92511919 ~ 92514384 (-) True G457385
TU516686 other downstream 659595 91896636 ~ 91914788 (-) True G456288
TU515974 other downstream 1315399 91257107 ~ 91258984 (-) True G455713
TU518094 other upstream 54584 92629338 ~ 92630812 (-) False LOC110524822
TU518092 other upstream 54718 92629472 ~ 92630812 (-) False LOC110524822
TU518093 other upstream 54787 92629541 ~ 92630812 (-) False LOC110524822
TU518091 other upstream 54851 92629605 ~ 92630812 (-) True LOC110524822
TU518175 other upstream 350942 92925696 ~ 92931639 (-) False G457491

Expression Profile