RNA id: TU524704



Basic Information


Item Value
RNA id TU524704
length 434
RNA type TUCP
GC content 0.36
exon number 2
gene id G462549
representative True

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 99483383 ~ 99483960 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ACAGGAGATAATGGAACAACAGGAGCTAATGGAAGTACAGgagctaatggaactacaggaGATAATGGAACAACAGgagctaatggaactacaggaGATAATGGAACTATTGAAGCTAATGGAACTATTGaagctaatggaactacaggaGATAATGGAACTATTGGAGATAATGGAGCTAATGGAACTACTAGAGATAATGGATATATTGGAGATAATGGAGATAATGGAACTATTGAAGCTAATGGAACTATTGAAGCTAATGGAACTATTGAAGCTAATGGAACTATTGGAGATAATGGAACTACATGAGCTAATGGAACTATTGAAGCTAATGGAACTATTGAAGCTAATGGAACTATTGAAGCTAATGGAACTATTGAAGCTAATGGAACTATTGAAGCTAATGGAACTATTGAAGATAATGGAACTAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU524666 lncRNA upstream 59415 99423620 ~ 99423968 (+) True G462514
TU524662 lncRNA upstream 63903 99418041 ~ 99419480 (+) True G462510
TU524660 lncRNA upstream 64322 99416872 ~ 99419061 (+) True G462509
TU524646 lncRNA upstream 97682 99385361 ~ 99385701 (+) True G462496
TU524643 lncRNA upstream 100985 99381783 ~ 99382398 (+) True G462493
TU524713 lncRNA downstream 13554 99497514 ~ 99498131 (+) True G462557
TU524731 lncRNA downstream 34765 99518725 ~ 99521899 (+) True G462565
TU524733 lncRNA downstream 46915 99530875 ~ 99531089 (+) True G462567
TU524942 lncRNA downstream 63872 99547832 ~ 99548040 (+) True G462724
TU524978 lncRNA downstream 106719 99590679 ~ 99590907 (+) True G462758
XM_036978995.1 mRNA upstream 81825 99374155 ~ 99401558 (+) False LOC110490602
XM_036978996.1 mRNA upstream 81825 99374155 ~ 99401558 (+) False LOC110490602
XM_036978997.1 mRNA upstream 81825 99374155 ~ 99401558 (+) False LOC110490602
XM_036978998.1 mRNA upstream 81825 99374155 ~ 99401558 (+) False LOC110490602
XM_036978999.1 mRNA upstream 81825 99374155 ~ 99401558 (+) False LOC110490602
XR_005051933.1 mRNA downstream 661643 100145603 ~ 100157146 (+) True LOC118964709
XM_021604870.2 mRNA downstream 698967 100182927 ~ 100191165 (+) False si:ch211-121a2.4
XM_021604869.2 mRNA downstream 698975 100182935 ~ 100191165 (+) False si:ch211-121a2.4
XM_036979016.1 mRNA downstream 698989 100182949 ~ 100191165 (+) False si:ch211-121a2.4
XM_036979015.1 mRNA downstream 699005 100182965 ~ 100191165 (+) False si:ch211-121a2.4
TU524551 other upstream 105278 99374197 ~ 99378105 (+) False LOC110490602
TU524555 other upstream 105278 99374331 ~ 99378105 (+) False LOC110490602
TU524242 other upstream 424029 99058883 ~ 99059354 (+) True G462233
TU523975 other upstream 650472 98832457 ~ 98832911 (+) False G462037
TU523934 other upstream 704316 98774482 ~ 98779067 (+) True G461999
TU525006 other downstream 582609 100066569 ~ 100086004 (+) False G462762
TU525518 other downstream 687177 100171137 ~ 100171897 (+) True G463119
TU525543 other downstream 742544 100226504 ~ 100230173 (+) False G463139
TU525578 other downstream 785601 100269561 ~ 100291594 (+) True G463164
TU525706 other downstream 995661 100479621 ~ 100482754 (+) True G463269

Expression Profile