Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021605124.2 |
| length | 1095 |
| RNA type | mRNA |
| GC content | 0.52 |
| exon number | 3 |
| gene id | LOC110525174 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 4790838 ~ 4792423 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|---|
| K00432 | gpx, btuE, bsaA; glutathione peroxidase |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU531439 | lncRNA | upstream | 75437 | 4713374 ~ 4715401 (+) | True | G467733 |
| TU531414 | lncRNA | upstream | 93355 | 4697245 ~ 4697483 (+) | True | G467713 |
| TU531405 | lncRNA | upstream | 100187 | 4690443 ~ 4690651 (+) | True | G467705 |
| TU531400 | lncRNA | upstream | 109943 | 4680689 ~ 4680895 (+) | True | G467700 |
| TU531332 | lncRNA | upstream | 158706 | 4631562 ~ 4632132 (+) | True | G467643 |
| TU531544 | lncRNA | downstream | 96964 | 4889387 ~ 4892909 (+) | True | G467819 |
| TU531548 | lncRNA | downstream | 116137 | 4908560 ~ 4908889 (+) | True | G467823 |
| TU531553 | lncRNA | downstream | 131001 | 4923424 ~ 4924952 (+) | True | G467828 |
| TU531524 | lncRNA | downstream | 142209 | 4934632 ~ 4935126 (+) | False | bmp2k |
| TU531528 | lncRNA | downstream | 142793 | 4935216 ~ 4935448 (+) | True | bmp2k |
| XM_021605116.2 | mRNA | upstream | 139967 | 4643954 ~ 4650871 (+) | False | LOC110525169 |
| XM_021605117.2 | mRNA | upstream | 139967 | 4644857 ~ 4650871 (+) | True | LOC110525169 |
| XR_005051986.1 | mRNA | upstream | 196648 | 4592804 ~ 4594190 (+) | True | LOC118964808 |
| XM_036979238.1 | mRNA | upstream | 207478 | 4447482 ~ 4583360 (+) | False | LOC110525072 |
| XM_036979239.1 | mRNA | upstream | 207682 | 4489299 ~ 4583156 (+) | True | LOC110525072 |
| XM_036979244.1 | mRNA | downstream | 50452 | 4842875 ~ 4935449 (+) | False | bmp2k |
| XM_036979245.1 | mRNA | downstream | 50453 | 4842876 ~ 4935449 (+) | False | bmp2k |
| XR_005051987.1 | mRNA | downstream | 122443 | 4914866 ~ 4918091 (+) | True | LOC118964809 |
| XM_021605130.2 | mRNA | downstream | 787351 | 5579774 ~ 5585518 (+) | False | prdm8b |
| XM_036979247.1 | mRNA | downstream | 787352 | 5579775 ~ 5585518 (+) | True | prdm8b |
| TU530344 | other | upstream | 1017498 | 3772864 ~ 3773340 (+) | True | G466813 |
| TU528784 | other | upstream | 1808413 | 2978842 ~ 2982425 (+) | True | G465578 |
| TU528673 | other | upstream | 1956728 | 2805383 ~ 2834110 (+) | True | LOC110525071 |
| TU528467 | other | upstream | 2381580 | 2399761 ~ 2409258 (+) | True | zfr |
| TU532741 | other | downstream | 1315956 | 6108379 ~ 6156681 (+) | False | G468732 |
| TU532738 | other | downstream | 1363024 | 6155447 ~ 6156681 (+) | False | G468732 |
| TU532739 | other | downstream | 1363024 | 6155447 ~ 6156681 (+) | True | G468732 |
| TU532623 | other | downstream | 1402349 | 6194772 ~ 6199155 (+) | True | G468643 |
| TU532773 | other | downstream | 1417776 | 6210199 ~ 6244501 (+) | True | G468755 |
