Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_036981819.1 |
| length | 1216 |
| RNA type | mRNA |
| GC content | 0.43 |
| exon number | 1 |
| gene id | LOC118965066 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 5623100 ~ 5624315 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0008543 | fibroblast growth factor receptor signaling pathway | biological_process |
| GO:0005576 | extracellular region | cellular_component |
| GO:0005104 | fibroblast growth factor receptor binding | molecular_function |
| GO:0008083 | growth factor activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU532281 | lncRNA | upstream | 30013 | 5547735 ~ 5593087 (+) | True | G468404 |
| TU532265 | lncRNA | upstream | 91237 | 5531630 ~ 5531863 (+) | True | G468388 |
| TU532258 | lncRNA | upstream | 99653 | 5522827 ~ 5523447 (+) | True | G468381 |
| TU532227 | lncRNA | upstream | 113196 | 5463182 ~ 5509904 (+) | True | G468371 |
| TU532223 | lncRNA | upstream | 163383 | 5459514 ~ 5459717 (+) | True | G468369 |
| TU532334 | lncRNA | downstream | 73250 | 5697565 ~ 5698207 (+) | True | G468445 |
| TU532374 | lncRNA | downstream | 140864 | 5765179 ~ 5765640 (+) | True | G468483 |
| TU532557 | lncRNA | downstream | 268682 | 5892997 ~ 5893422 (+) | True | G468621 |
| TU532566 | lncRNA | downstream | 278840 | 5903155 ~ 5904297 (+) | True | G468626 |
| TU532648 | lncRNA | downstream | 301091 | 5925406 ~ 5926834 (+) | True | G468668 |
| XM_021605130.2 | mRNA | upstream | 37582 | 5579774 ~ 5585518 (+) | False | prdm8b |
| XM_036979247.1 | mRNA | upstream | 37582 | 5579775 ~ 5585518 (+) | True | prdm8b |
| XM_036979244.1 | mRNA | upstream | 687651 | 4842875 ~ 4935449 (+) | False | bmp2k |
| XM_036979245.1 | mRNA | upstream | 687651 | 4842876 ~ 4935449 (+) | False | bmp2k |
| XR_005051987.1 | mRNA | upstream | 705009 | 4914866 ~ 4918091 (+) | True | LOC118964809 |
| XM_036979248.1 | mRNA | downstream | 32953 | 5657268 ~ 5658483 (+) | True | LOC118964810 |
| LOC110525066 | mRNA | downstream | 374511 | 5998826 ~ 6036553 (+) | True | LOC110525066 |
| XM_036979255.1 | mRNA | downstream | 436293 | 6060608 ~ 6147999 (+) | False | LOC110510489 |
| XM_036979260.1 | mRNA | downstream | 436297 | 6060612 ~ 6147999 (+) | False | LOC110510489 |
| XM_036979254.1 | mRNA | downstream | 439031 | 6063346 ~ 6147999 (+) | False | LOC110510489 |
| TU530344 | other | upstream | 1849760 | 3772864 ~ 3773340 (+) | True | G466813 |
| TU528784 | other | upstream | 2640675 | 2978842 ~ 2982425 (+) | True | G465578 |
| TU528673 | other | upstream | 2788990 | 2805383 ~ 2834110 (+) | True | LOC110525071 |
| TU528467 | other | upstream | 3213842 | 2399761 ~ 2409258 (+) | True | zfr |
| TU532741 | other | downstream | 484064 | 6108379 ~ 6156681 (+) | False | G468732 |
| TU532738 | other | downstream | 531132 | 6155447 ~ 6156681 (+) | False | G468732 |
| TU532739 | other | downstream | 531132 | 6155447 ~ 6156681 (+) | True | G468732 |
| TU532623 | other | downstream | 570457 | 6194772 ~ 6199155 (+) | True | G468643 |
| TU532773 | other | downstream | 585884 | 6210199 ~ 6244501 (+) | True | G468755 |
