RNA id: XM_036979286.1



Basic Information


Item Value
RNA id XM_036979286.1
length 489
RNA type mRNA
GC content 0.47
exon number 4
gene id LOC110510500
representative False

Chromosome Information


Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 6224254 ~ 6231849 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


CCGACCACAGCCAACACAGACTCAAGATGCCTTTCAAGCCACACTACCTGTTGGTGTCCCTGACTCTCTGCTGGTTCGTGGCTCTTCAAGCATTCCCCATGAACGGCTGTGCTGCATGTCAGAAGTGTCGCTGCATCCGGACGTCCTCTGCTTTCATCTCTCCTCGGCTGTTCCACAGGATAGAGATCCTACCTCCAGGTGCCCACTGTCGTCAAACAGAGATCATCGTTACCAAGAAGGACAAAGCCACCGTCTGTGTGACTCCAGATGCACGATGGATCAACAAAGTCATTGTCAAGTTACAAAGTACCAACAAGAGGAAGAGAAGTGCAGAACTTCCCCATCTCAACCACCATTGAGTGAATTGGAACAGGAATGTATCAAGTTGGAGCTAAATGGAAATGTGATACCAATGTGATACCAATGTAATACCAATGTAATACCAATGTGATACCAATGTGATGCCAATGTAATACCAATGTAATACCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU532770 lncRNA upstream 14549 6205082 ~ 6209705 (+) False G468754
TU532771 lncRNA upstream 14549 6206980 ~ 6209705 (+) True G468754
TU532760 lncRNA upstream 18442 6180233 ~ 6205812 (+) False G468747
TU532761 lncRNA upstream 18442 6202643 ~ 6205812 (+) True G468747
TU532615 lncRNA upstream 22284 6200159 ~ 6201970 (+) True G468635
TU532633 lncRNA downstream 19778 6251178 ~ 6363339 (+) True G468653
TU532799 lncRNA downstream 26568 6257968 ~ 6261479 (+) True G468770
TU532797 lncRNA downstream 48395 6279795 ~ 6309385 (+) False G468768
TU532795 lncRNA downstream 50751 6282151 ~ 6343615 (+) False G468768
TU532814 lncRNA downstream 61808 6293208 ~ 6316367 (+) True G468785
XM_036979262.1 mRNA upstream 50843 6166943 ~ 6173411 (+) False LOC118964813
XM_036979253.1 mRNA upstream 76255 6112480 ~ 6147999 (+) False LOC110510489
XM_036979285.1 mRNA downstream 191741 6423141 ~ 6428139 (+) True LOC110518225
XM_036979284.1 mRNA downstream 250612 6482012 ~ 6488606 (+) True LOC118964815
XM_021605151.2 mRNA downstream 377521 6608921 ~ 6609844 (+) True LOC110525188
XM_021605152.2 mRNA downstream 451507 6682907 ~ 6692547 (+) True ydjc
XM_036979293.1 mRNA downstream 479494 6710894 ~ 6713091 (+) False ccl19a.2
TU532623 other upstream 25099 6194772 ~ 6199155 (+) True G468643
TU532741 other upstream 67573 6108379 ~ 6156681 (+) False G468732
TU532738 other upstream 67573 6155447 ~ 6156681 (+) False G468732
TU532739 other upstream 67573 6155447 ~ 6156681 (+) True G468732
TU530344 other upstream 2450914 3772864 ~ 3773340 (+) True G466813
TU532794 other downstream 23076 6254476 ~ 6343615 (+) False G468768
TU532821 other downstream 146239 6377639 ~ 6379269 (+) True G468791
TU532790 other downstream 192014 6423414 ~ 6488418 (+) False G468765
TU532896 other downstream 319577 6550977 ~ 6553095 (+) False G468841
TU532978 other downstream 441108 6672508 ~ 6674387 (+) False G468887

Expression Profile