Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU539038 |
| length | 229 |
| lncRNA type | sense_over |
| GC content | 0.38 |
| exon number | 1 |
| gene id | sh2b3 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 11888937 ~ 11950017 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU539074 | lncRNA | upstream | 56746 | 11892164 ~ 11892377 (+) | True | G474193 |
| TU539070 | lncRNA | upstream | 64530 | 11884234 ~ 11884593 (+) | True | G474189 |
| TU539066 | lncRNA | upstream | 68282 | 11880590 ~ 11880841 (+) | True | G474185 |
| TU539023 | lncRNA | upstream | 105886 | 11842909 ~ 11843237 (+) | True | G474143 |
| TU539022 | lncRNA | upstream | 107038 | 11841774 ~ 11842085 (+) | True | G474142 |
| TU539046 | lncRNA | downstream | 730 | 11950081 ~ 11950396 (+) | True | G474165 |
| TU539041 | lncRNA | downstream | 1480 | 11950831 ~ 11951136 (+) | True | G474160 |
| TU539040 | lncRNA | downstream | 3185 | 11952536 ~ 11953870 (+) | True | G474159 |
| TU539106 | lncRNA | downstream | 37364 | 11986715 ~ 11987031 (+) | True | G474221 |
| TU539095 | lncRNA | downstream | 39252 | 11988603 ~ 11988771 (+) | False | LOC110525268 |
| XM_021605250.2 | mRNA | upstream | 91561 | 11853896 ~ 11857562 (+) | False | pheta1 |
| XM_021605251.2 | mRNA | upstream | 91561 | 11853900 ~ 11857562 (+) | False | pheta1 |
| XM_036979410.1 | mRNA | upstream | 91561 | 11854067 ~ 11857562 (+) | True | pheta1 |
| XM_021605247.2 | mRNA | upstream | 111251 | 11824359 ~ 11837872 (+) | False | LOC110525265 |
| XM_021605262.2 | mRNA | downstream | 39011 | 11988362 ~ 12010019 (+) | False | LOC110525268 |
| XM_021605263.2 | mRNA | downstream | 39012 | 11988363 ~ 12010019 (+) | False | LOC110525268 |
| XM_021605268.2 | mRNA | downstream | 295030 | 12244381 ~ 12247297 (+) | True | LOC110525274 |
| XM_036979420.1 | mRNA | downstream | 323210 | 12272561 ~ 12282625 (+) | False | LOC110525277 |
| XR_005052022.1 | mRNA | downstream | 323210 | 12272561 ~ 12282625 (+) | False | LOC110525277 |
| TU537828 | other | upstream | 669858 | 11278338 ~ 11279265 (+) | True | G473070 |
| TU537053 | other | upstream | 1668000 | 10280306 ~ 10281123 (+) | True | G472364 |
| TU535218 | other | upstream | 2675170 | 9268378 ~ 9273953 (+) | False | LOC110525088 |
| TU535229 | other | upstream | 2723610 | 9223351 ~ 9225513 (+) | True | G470770 |
| TU535014 | other | upstream | 3138180 | 8809973 ~ 8810943 (+) | True | G470599 |
| TU539228 | other | downstream | 238937 | 12188288 ~ 12190572 (+) | True | G474321 |
| TU539852 | other | downstream | 554409 | 12503760 ~ 12504119 (+) | True | G474851 |
| TU539960 | other | downstream | 762955 | 12712306 ~ 12713298 (+) | True | G474949 |
| TU540778 | other | downstream | 1364328 | 13313679 ~ 13313969 (+) | True | G475692 |
| TU541379 | other | downstream | 2035489 | 13984840 ~ 13985259 (+) | True | G476234 |
