Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00031926 |
| length | 1630 |
| RNA type | mRNA |
| GC content | 0.55 |
| exon number | 11 |
| gene id | XLOC_016182 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007113.7 |
| NCBI id | CM002886.2 |
| chromosome length | 59640629 |
| location | 9868601 ~ 9915870 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0008154 | actin polymerization or depolymerization | biological_process |
| GO:0005622 | intracellular anatomical structure | cellular_component |
| GO:0030027 | lamellipodium | cellular_component |
| GO:0017124 | SH3 domain binding | molecular_function |
| GO:0030296 | protein tyrosine kinase activator activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-060929-1182 | Predicted to enable SH3 domain binding activity. Predicted to be located in cell junction; cytoskeleton; and filopodium. Predicted to be active in lamellipodium. Orthologous to human ABI1 (abl interactor 1). |
| ensembl_id | ENSDART00000177556 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00031924 | lncRNA | downstream | 5670 | 9862833 ~ 9863388 (-) | True | XLOC_016181 |
| TCONS_00031921 | lncRNA | downstream | 64511 | 9804247 ~ 9804547 (-) | False | XLOC_016179 |
| TCONS_00033778 | lncRNA | downstream | 120842 | 9746437 ~ 9748216 (-) | False | XLOC_016178 |
| TCONS_00031942 | lncRNA | upstream | 513023 | 10428893 ~ 10432848 (-) | True | XLOC_016191 |
| TCONS_00031950 | lncRNA | upstream | 706365 | 10622235 ~ 10632377 (-) | True | XLOC_016194 |
| TCONS_00031964 | lncRNA | upstream | 1040351 | 10956221 ~ 11027191 (-) | True | XLOC_016200 |
| TCONS_00031975 | lncRNA | upstream | 1335227 | 11251097 ~ 11258378 (-) | True | XLOC_016203 |
| TCONS_00031976 | lncRNA | upstream | 1414854 | 11330724 ~ 11331316 (-) | True | XLOC_016204 |
| TCONS_00031923 | mRNA | downstream | 11126 | 9848636 ~ 9857932 (-) | True | XLOC_016180 |
| TCONS_00031917 | mRNA | downstream | 50385 | 9789833 ~ 9818673 (-) | False | XLOC_016179 |
| TCONS_00031927 | mRNA | upstream | 42211 | 9958081 ~ 9971651 (-) | False | XLOC_016183 |
| TCONS_00031928 | mRNA | upstream | 42211 | 9958081 ~ 9971728 (-) | False | XLOC_016183 |
| TCONS_00031929 | mRNA | upstream | 43190 | 9959060 ~ 9971609 (-) | True | XLOC_016183 |
| TCONS_00031930 | mRNA | upstream | 45998 | 9961868 ~ 10014821 (-) | True | XLOC_016184 |
| TCONS_00031931 | mRNA | upstream | 67209 | 9983079 ~ 9989947 (-) | False | XLOC_016185 |
| TCONS_00031915 | other | downstream | 121627 | 9747302 ~ 9747431 (-) | True | XLOC_016178 |
| TCONS_00031914 | other | downstream | 122065 | 9746858 ~ 9746993 (-) | False | XLOC_016178 |
| TCONS_00031909 | other | downstream | 180873 | 9688055 ~ 9688185 (-) | True | XLOC_016176 |
| TCONS_00031903 | other | downstream | 324897 | 9529488 ~ 9544161 (-) | False | XLOC_016171 |
| TCONS_00031900 | other | downstream | 462383 | 9406558 ~ 9406675 (-) | True | XLOC_016169 |
| TCONS_00031958 | other | upstream | 989192 | 10905062 ~ 10905179 (-) | True | XLOC_016199 |
| TCONS_00031983 | other | upstream | 1740683 | 11656553 ~ 11662923 (-) | True | XLOC_016210 |
| TCONS_00031991 | other | upstream | 2308553 | 12224423 ~ 12224539 (-) | True | XLOC_016216 |
| TCONS_00031998 | other | upstream | 3336282 | 13252152 ~ 13254797 (-) | True | XLOC_016221 |
| TCONS_00032033 | other | upstream | 5078523 | 14994393 ~ 14994490 (-) | True | XLOC_016250 |
