Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU545731 |
| length | 258 |
| lncRNA type | read_through |
| GC content | 0.44 |
| exon number | 1 |
| gene id | LOC110525341 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 17488588 ~ 17496137 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0006468 | protein phosphorylation | biological_process |
| GO:0005524 | ATP binding | molecular_function |
| GO:0004674 | protein serine/threonine kinase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU545730 | lncRNA | upstream | 170 | 17495159 ~ 17495434 (+) | False | LOC110525341 |
| TU545758 | lncRNA | upstream | 14770 | 17479515 ~ 17480834 (+) | True | G480244 |
| TU545744 | lncRNA | upstream | 30451 | 17464534 ~ 17465153 (+) | True | G480230 |
| TU545738 | lncRNA | upstream | 43523 | 17451583 ~ 17452081 (+) | True | G480224 |
| TU545737 | lncRNA | upstream | 44601 | 17450678 ~ 17451003 (+) | True | G480223 |
| TU545732 | lncRNA | downstream | 1096 | 17496957 ~ 17497499 (+) | True | G480218 |
| TU545764 | lncRNA | downstream | 3500 | 17499361 ~ 17499802 (+) | True | G480250 |
| TU545825 | lncRNA | downstream | 83982 | 17579843 ~ 17580044 (+) | True | G480304 |
| TU545830 | lncRNA | downstream | 87592 | 17583453 ~ 17583685 (+) | True | G480309 |
| TU545832 | lncRNA | downstream | 91832 | 17587693 ~ 17587971 (+) | True | G480311 |
| XM_036979473.1 | mRNA | upstream | 82748 | 17360752 ~ 17412856 (+) | False | LOC110525335 |
| XR_005052029.1 | mRNA | downstream | 30437 | 17526298 ~ 17534335 (+) | False | LOC110525345 |
| XR_002473739.2 | mRNA | downstream | 30443 | 17526304 ~ 17534335 (+) | True | LOC110525345 |
| XM_021605385.2 | mRNA | downstream | 141107 | 17636968 ~ 17643111 (+) | True | LOC110525350 |
| XM_036979490.1 | mRNA | downstream | 161205 | 17657066 ~ 17710433 (+) | False | LOC110525352 |
| XM_036979491.1 | mRNA | downstream | 161205 | 17657066 ~ 17710445 (+) | False | LOC110525352 |
| TU545733 | other | upstream | 49673 | 17444753 ~ 17445931 (+) | True | G480219 |
| TU545623 | other | upstream | 174439 | 17320774 ~ 17321165 (+) | True | G480128 |
| TU545405 | other | upstream | 388177 | 17100986 ~ 17107427 (+) | True | dab2ipa |
| TU545301 | other | upstream | 513384 | 16979182 ~ 16982220 (+) | True | traf1 |
| TU544659 | other | upstream | 1135853 | 16359416 ~ 16359751 (+) | True | G479239 |
| TU545556 | other | downstream | 222009 | 17717870 ~ 17718201 (+) | True | G480062 |
| TU546627 | other | downstream | 418899 | 17914760 ~ 17978399 (+) | False | LOC110525363 |
| TU546849 | other | downstream | 788936 | 18284797 ~ 18285312 (+) | True | G481201 |
| TU546853 | other | downstream | 794372 | 18290233 ~ 18290467 (+) | True | G481205 |
| TU546804 | other | downstream | 839471 | 18335332 ~ 18340566 (+) | True | G481159 |
