Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00031972 |
| length | 2435 |
| RNA type | mRNA |
| GC content | 0.48 |
| exon number | 22 |
| gene id | XLOC_016203 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007113.7 |
| NCBI id | CM002886.2 |
| chromosome length | 59640629 |
| location | 11216814 ~ 11468654 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0055085 | transmembrane transport | biological_process |
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0022857 | transmembrane transporter activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-070705-333 | Predicted to enable transmembrane transporter activity. Predicted to be involved in transmembrane transport. Predicted to be integral component of membrane. Predicted to be active in membrane. Orthologous to human SLC44A5 (solute carrier family 44 member 5). |
| ensembl_id | ENSDART00000131229 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00031964 | lncRNA | downstream | 189623 | 10956221 ~ 11027191 (-) | True | XLOC_016200 |
| TCONS_00031950 | lncRNA | downstream | 584437 | 10622235 ~ 10632377 (-) | True | XLOC_016194 |
| TCONS_00031942 | lncRNA | downstream | 783966 | 10428893 ~ 10432848 (-) | True | XLOC_016191 |
| TCONS_00031924 | lncRNA | downstream | 1353426 | 9862833 ~ 9863388 (-) | True | XLOC_016181 |
| TCONS_00031921 | lncRNA | downstream | 1412267 | 9804247 ~ 9804547 (-) | False | XLOC_016179 |
| TCONS_00033779 | lncRNA | upstream | 88321 | 11556975 ~ 11558124 (-) | True | XLOC_016208 |
| TCONS_00031984 | lncRNA | upstream | 292172 | 11760826 ~ 11767204 (-) | True | XLOC_016211 |
| TCONS_00031986 | lncRNA | upstream | 507607 | 11976261 ~ 11981305 (-) | False | XLOC_016213 |
| TCONS_00033352 | lncRNA | upstream | 508382 | 11977036 ~ 11978594 (-) | True | XLOC_016213 |
| TCONS_00033780 | lncRNA | upstream | 1235303 | 12703957 ~ 12704384 (-) | True | XLOC_016218 |
| TCONS_00031968 | mRNA | downstream | 96594 | 11100613 ~ 11120220 (-) | False | XLOC_016202 |
| TCONS_00031969 | mRNA | downstream | 97415 | 11103236 ~ 11119399 (-) | False | XLOC_016202 |
| TCONS_00031971 | mRNA | downstream | 97511 | 11110269 ~ 11119303 (-) | True | XLOC_016202 |
| TCONS_00031970 | mRNA | downstream | 97718 | 11104645 ~ 11119096 (-) | False | XLOC_016202 |
| TCONS_00031967 | mRNA | downstream | 115485 | 11087074 ~ 11101329 (-) | False | XLOC_016202 |
| TCONS_00031978 | mRNA | upstream | 14418 | 11483072 ~ 11504347 (-) | False | XLOC_016206 |
| TCONS_00031979 | mRNA | upstream | 14522 | 11483176 ~ 11504778 (-) | True | XLOC_016206 |
| TCONS_00031980 | mRNA | upstream | 40037 | 11508691 ~ 11512819 (-) | True | XLOC_016207 |
| TCONS_00031981 | mRNA | upstream | 164599 | 11633253 ~ 11648731 (-) | True | XLOC_016209 |
| TCONS_00031982 | mRNA | upstream | 182522 | 11651176 ~ 11662851 (-) | False | XLOC_016210 |
| TCONS_00031958 | other | downstream | 311635 | 10905062 ~ 10905179 (-) | True | XLOC_016199 |
| TCONS_00031915 | other | downstream | 1469383 | 9747302 ~ 9747431 (-) | True | XLOC_016178 |
| TCONS_00031914 | other | downstream | 1469821 | 9746858 ~ 9746993 (-) | False | XLOC_016178 |
| TCONS_00031909 | other | downstream | 1528629 | 9688055 ~ 9688185 (-) | True | XLOC_016176 |
| TCONS_00031903 | other | downstream | 1672653 | 9529488 ~ 9544161 (-) | False | XLOC_016171 |
| TCONS_00031983 | other | upstream | 187899 | 11656553 ~ 11662923 (-) | True | XLOC_016210 |
| TCONS_00031991 | other | upstream | 755769 | 12224423 ~ 12224539 (-) | True | XLOC_016216 |
| TCONS_00031998 | other | upstream | 1783498 | 13252152 ~ 13254797 (-) | True | XLOC_016221 |
| TCONS_00032033 | other | upstream | 3525739 | 14994393 ~ 14994490 (-) | True | XLOC_016250 |
| TCONS_00032037 | other | upstream | 3559992 | 15028646 ~ 15033121 (-) | True | XLOC_016251 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| grasscarp (Ctenopharyngodon idella) | CI01000004_03051206_03066124.mRNA | True | 2170 | mRNA | 0.47 | 14 | CI01000004 | 3051206 ~ 3066588 (+) |
