RNA id: XM_021605600.2


Basic Information

Item Value
RNA id XM_021605600.2
length 3684
RNA type mRNA
GC content 0.43
exon number 13
gene id dpp7
representative True

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 21445228 ~ 21453374 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

CAAAACGTTGCCTGGGTTCAGAGGTCAATAAACAAACTCAGCTGTGAGGAAGCTATGTCATGTGATTTATACAATTAACATTTCGAAACAGTTATTTGGCTTTCACCAACAGCCTTTTGAATATGACAAATTGGGGTTTTATTTGCGTTGTTGTCTTGCTCTCCCTCTACTCTGAGACGCAGGGGCTTACACACAGCCGTTTTCAGGTCAAGAATCATGGGTACAGCACTGACCCAAAACCCCAGTTTAAAGAGAAATACTTTCCCCAAATAATGGACCACTTCAACTTCAACAGTATGGGCAATGGAACCTATGAGCAACGGTACCTAATCACAGATGAGTACTGGAAGAGAGGTTCTGGACCCATCTTCTTCTACACGGGAAATGAGGGAGACATCTGGGAGTTTGCCCTGAACTCTGGATTCATCACAGAGCTGGCAGCACAGCAAAGAGCCCTAGTCATATTTGCTGAGCATAGATACTATGGCAAATCACTCCCATTTGGCCAGGACTCGTTCAACATCCCAGAGGTTGGGTTACTGACGGTAGAACAGGCCCTAGCAGACTATGCTATCATGATCACAGAACTGAAACAGCAGCTAGGAGCCTCCGCATGTCCAGTCATTGTCTTTGGTGGAAGTTATGGAGGAATGTTGTCAGTCTACATGAGACTGAGGTACCCAAACATTGTAGCAGGGGCTCTGGCTGCCAGCGCTCCCATCCTGTCTACTGCAGGGATGGGGGAATCAAAACAGTTTTTCCAGGATGTCACATCCgatttTGAGAACTATGCCCCAGAGTGTAGGGATGCTGTAAGAGGGGCGTTCCAGAGGCTGCAAGACTTGGCTCAAATAGAAGACTATGGCCGTATCCAGTCAGCGTTCTCCCTGTGCAAGACTCCATCCTCATATAAGGACATCCACCAGCTGAATGGGCTCTTACGTAATGCCTTCACACTCATGGCCATGCTGGACTACCCCTACAGCACCCACTTCATGGGTAGCATGCCTGCCAACCCAGTCAAGGTGGCTTGTGACACCATGTTGGGTGGAGCTGATTTGCTGCATGCCCTAAAAGACACTGCAGGAATAGTGTACAACTCTACAGGAGATCTGACCTGCTTTGACCTCTACACGCTGTATGTGGAATGTGCTGACCCAACTGGCTGTGGACTGGGCTTCAATAGCCTGGCCTGGGACTACCAGGCCTGCACAGAGATTGAGATGTGCTTTGAGAGCAACAATGTAAGTGACATGTTCCCTCTTATGCCCTTCACTGAGAAACAGAGGGAACAATACTGCTCCAAGCGCTGGGGGGTGATCCCCCGACCTGGCTGGCTCAAAACCCAGTTTTGGGGTGATGCCCTCTCCACGGCCAGCAACATCATTTTCTCCAATGGAGATCTGGACCCATGGGCAAATGGAGGGGTGAGAAAGTCCTTGAGCTCATCACTGATTGCAATCAACATCTCAGAGGGGGCTCACCATTTGGACCTGAGAGAGGCCAATGATGCTGATCCGGCATCAGTTATAAAGGCCCGTAAGATGGAGTCCGACACCATCGCTCAGTGGGTGaaaatggaggagaggaaatgCCTTCAACGTGGATTTTAATGATTGACAGTTGTAAAAGGTTGTTCAATAAAGTATTTTAATCTTGACATTTATACAAATTTAAAGCAGGTCCATAGTTTTATTGTAAACCAAGTGACATTGTGGCACATTTTGTAAGTTCATGATTTAGACAGTTTTGTAGACCCAGAACCAAACACTGGTCCCATTAGCCCCCAGCTCTTGGTTTAGCATATTCATTCCCAAGTTGAAAAACAGTTCAGTCGACATGGGTGTACTACTTTCCAGCTGAGTCACTGATGTTGCAGGGTCATAACAAGGTACCCCAAAATACACAGTATTGCAAATGACACAGGCGCATAGTTTCATTGAAATGCAGATTCTCACCAATTTGATATTGATTGCAAATGTCTACAATATTGCAATAAAAATGATTAAATCAGATCCGCTTTCGACATCAGCATAGGTGTTGTTTTGGTGGTGTCAGGTGGAACTGCactagagctgtcaaatccacaagcggctcctGGCATTGCCTAAATCGGACGTCGCATTAAGTGAAAGCCCAtacagccttgtttacaagttgaAACACGGgcatgtgagatgtaatctacacctccattaggctgCTAAAAATCCTAATTTTGTTGAATGATTTTCAATTGGAGTGTTTCtttatagcctacactttctcggTCTGAATTTCTAACAGGAGTAGGACGGGTGTGGCTTTGTGAATGATCAAGGCAGCTGCTCACCAATTTGACACCTCGGACATGCCAAAACATCAGCTAGCGCCGGTTAACacaatctgattgaatctaggccttattTTCCCTTGAGGTTCCAGTTGGGTAGGCTTATTTCATATGGTATTAGTGGTTTGAAATAAAAGTTCTCCACAGCTTGTGGGCTGAGTGAGTCAGAGCAGCTGGATTTAATCCATATCGTGGCAGATTCGTGCtaaaatgtaaaggtcatttgtGATTGAGCCGACATGCAGCGTTTACGTGAATGCGGTCGCCACGAAtgtggtaacattgcctttaaatttctatCGTGCTATAAGACGGATCTTCcacgatacggattgaatccagcccttaaCCATGACAATATCTCTGACCTTGGTTAGCAGAGATCAGGCAGCAGCTGACTTCAGATGCTGTATCAAAATCTCCCAATAGCATTTAATTTACATTGTTATAAAATAGGGAAATGGCTTATTGTCATTCTTAACAGAATGATGAATGTAGAATAATTCCAGATTCCAGTTGTTTTAATAACTAGGATATCTTTGGTGTAGAAAAGTTTAGGATCCAGCTGAAGGATTTTTAAAAAAGGAATCAGAAATGAGCAGCAGTATATTAACTGATCAGAGATGTGAAAAAGGGATCGGAAGCAGAGCCCTTAGTTTCATGATATATACTGTAAGTCTATACACAGTGAGAGTTATGGAAGTATACCCAGCAAATGGTTGGACAGTTGGAAAATGACATTCCTTAATTCAAAATCACACCATGATTATGTAACAAATACACATCTTTGCACAACTATTCACATCAACTATGTACATTTCAATAACAAAACATGAATATGTCCAAAGAGTTTCATAATGTTGTCCAGAGCAACGTTGAAGGCACAAGTGAAACAACACTAAAGGAGGGGAGAGCTGAACATTGAAATAGGGAAGAAAACTACATTTCACACTTAAGATGTTGAGTTTGGTCTCAATAGAATGAGTGAAAGTGTACATCATAACATTCAATATAGTTATTTACAGGAATGATGGTGAAGTATAGGATCTACAGCCCAGGGCCCTTTTTCCCCAAAAGCAtgttaaggctaagttcatcgttaGGATCCTATGGTTTTAACGAACTTAACATGCTTTTAGGAAACCAGGACCAGTTCTACTGCTACTCCAGTTTCTGTGGCATAATCCACATTTACAATTCAGTCTATCCAGATATAGTATAACACACTACAAATCAATTCAAATTATATGGACTAAAATCAGCTTAATCTCACAAATATATTTGTATAACTAAACTACCCAAGTGTTCACACTAGCTTGCCCTAATTTGATGCCATACAACAGGAATGATGA

Function

GO: NA

KEGG:

id description
K01276 DPP7; dipeptidyl-peptidase II

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU550806 lncRNA upstream 57787 21387157 ~ 21387441 (+) True G484641
TU550804 lncRNA upstream 59633 21385247 ~ 21385595 (+) True G484639
TU550784 lncRNA upstream 86711 21357776 ~ 21358517 (+) True G484619
TU550735 lncRNA upstream 93431 21351586 ~ 21351797 (+) True G484570
TU550781 lncRNA upstream 112520 21332137 ~ 21332708 (+) True G484616
TU551271 lncRNA downstream 256222 21709596 ~ 21709805 (+) True G485043
TU551357 lncRNA downstream 358343 21811717 ~ 21811925 (+) True G485121
TU551365 lncRNA downstream 372658 21826032 ~ 21826326 (+) True G485129
TU551329 lncRNA downstream 374252 21827626 ~ 21828343 (+) True G485093
TU551328 lncRNA downstream 375366 21828740 ~ 21831681 (+) True G485092
XM_036979601.1 mRNA upstream 634 21391871 ~ 21444594 (+) False LOC110525469
XM_036979602.1 mRNA upstream 634 21391871 ~ 21444594 (+) True LOC110525469
XM_021605596.2 mRNA upstream 114422 21318048 ~ 21330806 (+) True pmpca
XM_021605594.2 mRNA upstream 173083 21211574 ~ 21272145 (+) False ptgs1
XM_021604974.2 mRNA downstream 287670 21741044 ~ 21744737 (+) True LOC110525013
XM_021605611.2 mRNA downstream 358993 21812367 ~ 21818773 (+) True fgf17
XM_036980446.1 mRNA downstream 380203 21833577 ~ 21847552 (+) False fkbp15b
XM_021605614.2 mRNA downstream 394476 21847850 ~ 21852139 (+) True LOC110525481
XM_021605615.2 mRNA downstream 400790 21854164 ~ 21863431 (+) False ccn1l2
TU549738 other upstream 481902 20958755 ~ 20963326 (+) True LOC110525116
TU549652 other upstream 641422 20802776 ~ 20803806 (+) True G483669
TU549560 other upstream 842226 20600818 ~ 20603002 (+) False LOC110525431
TU549559 other upstream 842226 20601325 ~ 20603002 (+) True LOC110525431
TU549525 other upstream 908130 20534509 ~ 20537098 (+) True LOC110525429
TU550839 other downstream 10765 21464139 ~ 21466905 (+) True G484674
TU550899 other downstream 100358 21553732 ~ 21554097 (+) True G484726
TU552088 other downstream 987942 22441316 ~ 22444619 (+) True G485780
TU552480 other downstream 1220868 22674242 ~ 22674452 (+) True G486127
TU552742 other downstream 1737258 23190632 ~ 23191917 (+) True LOC110525518

Expression Profile