Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU561397 |
| length | 1184 |
| lncRNA type | sense_over |
| GC content | 0.44 |
| exon number | 1 |
| gene id | LOC110525678 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 28989407 ~ 29010716 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU561408 | lncRNA | downstream | 3623 | 28985711 ~ 28985927 (-) | True | G494130 |
| TU561400 | lncRNA | downstream | 18339 | 28970906 ~ 28971211 (-) | True | G494122 |
| TU560611 | lncRNA | downstream | 40413 | 28948864 ~ 28949137 (-) | True | G493419 |
| TU560603 | lncRNA | downstream | 51072 | 28938251 ~ 28938478 (-) | True | G493411 |
| TU560498 | lncRNA | downstream | 156007 | 28833311 ~ 28833543 (-) | True | G493313 |
| TU561432 | lncRNA | upstream | 49678 | 29040411 ~ 29040803 (-) | True | G494154 |
| TU561427 | lncRNA | upstream | 80414 | 29071147 ~ 29071635 (-) | True | LOC110526490 |
| TU561484 | lncRNA | upstream | 159006 | 29149739 ~ 29149956 (-) | True | G494205 |
| TU561487 | lncRNA | upstream | 166660 | 29157393 ~ 29157612 (-) | True | G494208 |
| TU561492 | lncRNA | upstream | 173874 | 29164607 ~ 29164809 (-) | True | G494212 |
| XM_036979786.1 | mRNA | downstream | 433537 | 28552264 ~ 28556013 (-) | True | zgc:153044 |
| XM_021606020.2 | mRNA | downstream | 433957 | 28552264 ~ 28555593 (-) | False | zgc:153044 |
| XM_036979787.1 | mRNA | downstream | 435159 | 28552264 ~ 28554391 (-) | False | zgc:153044 |
| XM_036979778.1 | mRNA | downstream | 521685 | 28455590 ~ 28467865 (-) | True | ube2d4 |
| XM_021606018.2 | mRNA | downstream | 521745 | 28455590 ~ 28467805 (-) | False | ube2d4 |
| XM_021606022.2 | mRNA | upstream | 32475 | 29023208 ~ 29070012 (-) | False | LOC110525679 |
| XM_021606024.2 | mRNA | upstream | 32475 | 29023208 ~ 29070012 (-) | True | LOC110525679 |
| XM_036979791.1 | mRNA | upstream | 79983 | 29070716 ~ 29269113 (-) | False | LOC110526490 |
| XM_036979789.1 | mRNA | upstream | 79983 | 29070716 ~ 29398888 (-) | False | LOC110526490 |
| XM_036979790.1 | mRNA | upstream | 79983 | 29070716 ~ 29398888 (-) | False | LOC110526490 |
| TU559292 | other | downstream | 1154248 | 27827231 ~ 27835302 (-) | False | LOC110525655 |
| TU559251 | other | downstream | 1252572 | 27734996 ~ 27736978 (-) | True | LOC110525653 |
| TU558571 | other | downstream | 1745357 | 27216607 ~ 27244193 (-) | True | G491539 |
| TU558306 | other | downstream | 2122392 | 26824867 ~ 26867158 (-) | True | G491291 |
| TU557799 | other | downstream | 2437923 | 26547222 ~ 26551627 (-) | True | LOC110525619 |
| TU561692 | other | upstream | 420482 | 29411215 ~ 29415314 (-) | True | G494389 |
| TU561696 | other | upstream | 487922 | 29478655 ~ 29483346 (-) | True | LOC110525681 |
| TU561743 | other | upstream | 511520 | 29502253 ~ 29503391 (-) | True | LOC110525684 |
| TU561865 | other | upstream | 684590 | 29675323 ~ 29675573 (-) | True | G494542 |
| TU562998 | other | upstream | 1535953 | 30526686 ~ 30527546 (-) | True | LOC110525714 |
