RNA id: XM_036980005.1


Basic Information

Item Value
RNA id XM_036980005.1
length 1973
RNA type mRNA
GC content 0.52
exon number 7
gene id gnb1l
representative True

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 35787045 ~ 35815869 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

GTACAGCCAAAAGCTCAATGGCCCAGCCTGTCAGCGCATGAACTGCAAAAAAAAATGCAGGCACTGGTAAGGACGACTGAAAAGAAGGGTCCTTCAAGTTCAACCGGGGCTTGTTTTGCATCGCTTCCCTACGCTTTGCTAAGTGGATGAGATGACTGTGGTGGTGACCTCCAGAGCTTCGAGAGTGACCCAGTGATGGCTCGTCCTGCCCCTGCTCCCCTGTACACCCTGAGGGGGGCTGGATCCCCCCTTAATGCCTTGCACTTCGGCTGCTGTGAAGGGGACCCTCCCCTGCTCTTTTCTGGctCAGGCCAGGGGTCAGTCCATGTGTGGAACCTGACCACCAGAAGAGCTGAGAGGGTTCTAGAAGGTCATTCTGGAGCCTCTGTCACCTGGCTCAACATGCTCCACCCCAGAGACACTCTCATCAGTCAGGGGCGCGACATGCGTGTGTGCTTGTGGGACCTGGCAGAGGGGCGCGGTGATGTCACGGACGCCCTGTGGACCGGCAGTGTGGGGTTCTGTCGCTGTTCCCTGCTAGAGACTGGCCCTGGGAGATGGCTACTGGCCCACGCTGGAGAAGccatggaggagGTGAAGATCATTGAGCTGCCCAGCAAGAGCCCAGTTTGCTCCCTGATACCACAAGCCAAGCTGGGGATGGTCATGTGCATCAAGCTATGGCAGCCAGACTCAAGCCCTGGCCCTCTCCTCCTGGCCGGTTATGAGGACGGCTCCCTGACGCTGTGGGACGTATCCCAGAGGTCTGTGCTGAGCCGTGCGGCCGCCCACCCTGAGCCCGTCATGTGTCTGGACTTTGACCCCGCCGGGCAGAGGGGCATCTCTGGCTCCTCCGAGAAGAGTCTCGCCTCCTGGAAGCTTGACGGACAGCACAGACTCCAGCTCCAGGAACCCGTAGCCCTTGTGAATCCTGGGATCTCCCAGCTGTGCATCCGGGGGGACCGGAAAATCGTGGCGTCGGCCGGCTGGGACCATCGTGTCCGTGTGTTTGGCTGGAAGAAGCTCCGGCCCCTGGCTGTCCTCCAGCACCACACAGACATGGTGCTAAGCCTGGCCTTCTCAGACCACCAGGACCCCAGGAACAGGATGCTGGCCGCGGGCTCCAAAGACCAGCGCATCAGCCTCTGGTCCATATACAACCAGGGCAGCTCGGACACTGGGTGAGCTACTGGGCCCTGTTGGTATGTTATAGGGAGTCTTCTCGCCAGTGATTATACCAACTCTTTTACGCTCCTTTTACTATCCCAGGACTATATCTGAATGTACTGACTAGAGCTGGACTATGTGAACTACTGGGTAGGAACTTCTGTCTCAGACTGTGAAGACATTTCCGACATAGCCAAGATGGATCAGGTCAGAATGAGATGTCTTTGTGCTTCCAAACAAAAGCTGTCAAGACGGCTGGTTAGTTCTGCTAACAATTCACTGAGACTTAATTTGAACACATTATTTTTGGTCAAAACCAACTGTTTTATTGTGTTTGCTTATCTGGTAGGAGATTTGCCTGAGCGGACTTGAATTTGAGGTATAAGTCGCGCCTGAGTGACTGTGTAATCCTGTGTTGTTGATCTAGTTTAACATTGCCCTCTGCTCTGACCTACACTGCATCAGTCAAACAGGGTTAACCACAGAACTTGGACAGAAGAGACAAAGCTGTTTGTTAAGGAGGGCCACTGAACAATCTTCCCTCAACTAGAGAGGCTGTCTGTACGGATTTGGACTTAAGAGGTTACTTGTATTTTCAGTTTGGTCTTAAATGTATTTCTGTTTGTCATTGTGAGTACTATATGTTGCCCCTGTGCATTGTGGGAAAAATGTGTCAAATTCAAACTGTGATTGGATGCGTTTAAGGTTTGTGAATTACACCCCAAGTCCACCAAATGTAAATAGTATCTGCTATGCTTTTTAACTTTTTTATTTCCTGGTAATAAATATGTTTTTCTGTACATCCA

Function

GO: NA

KEGG:

id description
K24732 GNB1L; guanine nucleotide-binding protein subunit beta-like protein 1

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU569193 lncRNA upstream 15239 35771615 ~ 35771817 (+) True G501145
TU568281 lncRNA upstream 199297 35546592 ~ 35587759 (+) True G500285
TU568220 lncRNA upstream 344857 35441415 ~ 35442199 (+) True G500225
TU568215 lncRNA upstream 357687 35423381 ~ 35429369 (+) True G500220
TU568121 lncRNA upstream 367032 35418917 ~ 35420024 (+) True G500127
TU569215 lncRNA downstream 737 35816606 ~ 35818595 (+) True G501151
TU569249 lncRNA downstream 37767 35853636 ~ 35925266 (+) True G501182
TU569404 lncRNA downstream 131407 35947276 ~ 35947476 (+) True G501325
TU569433 lncRNA downstream 164354 35980223 ~ 35980435 (+) True G501353
TU569437 lncRNA downstream 166449 35982318 ~ 35982550 (+) True G501357
XM_021606317.2 mRNA upstream 19110 35743748 ~ 35767946 (+) True txnrd2.2
XM_036979999.1 mRNA upstream 47016 35579925 ~ 35740040 (+) False LOC110525852
XM_036980006.1 mRNA downstream 252899 36068768 ~ 36123969 (+) False LOC110525856
XM_021606326.2 mRNA downstream 311176 36127045 ~ 36140318 (+) False LOC110525857
XM_036980007.1 mRNA downstream 311219 36127088 ~ 36140318 (+) False LOC110525857
XM_036980008.1 mRNA downstream 311219 36127088 ~ 36140318 (+) False LOC110525857
XM_036980009.1 mRNA downstream 311219 36127088 ~ 36140318 (+) False LOC110525857
TU567034 other upstream 1635319 34151140 ~ 34151737 (+) True G499111
TU565715 other upstream 2322001 33461635 ~ 33465055 (+) True LOC110525816
TU565692 other upstream 2466708 33317637 ~ 33320348 (+) True c6h22orf39
TU565528 other upstream 2622795 33154691 ~ 33164261 (+) True LOC110525799
TU565537 other upstream 2637058 33146467 ~ 33149998 (+) False LOC110525799
TU573608 other downstream 3454090 39269959 ~ 39311874 (+) True fancc
TU574234 other downstream 3858143 39674012 ~ 39678263 (+) False LOC110525927
TU574235 other downstream 3858143 39674012 ~ 39678263 (+) False LOC110525927
TU574236 other downstream 3858143 39674012 ~ 39680031 (+) False LOC110525927
TU574237 other downstream 3858143 39674012 ~ 39680031 (+) True LOC110525927

Expression Profile