Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021606432.2 |
| length | 702 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 2 |
| gene id | LOC110525918 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 39033662 ~ 39035194 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|---|
| K17422 | MRPL41; large subunit ribosomal protein L41 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU573214 | lncRNA | upstream | 6188 | 39026990 ~ 39027474 (+) | True | G504865 |
| TU573147 | lncRNA | upstream | 120046 | 38913328 ~ 38913616 (+) | True | G504798 |
| TU573145 | lncRNA | upstream | 122205 | 38911235 ~ 38911457 (+) | True | G504796 |
| TU573141 | lncRNA | upstream | 123600 | 38905132 ~ 38910062 (+) | True | G504794 |
| TU573084 | lncRNA | upstream | 226620 | 38806623 ~ 38807042 (+) | True | G504742 |
| TU573250 | lncRNA | downstream | 24128 | 39059322 ~ 39059625 (+) | True | G504896 |
| TU573257 | lncRNA | downstream | 47690 | 39082884 ~ 39083096 (+) | True | G504903 |
| TU573240 | lncRNA | downstream | 49723 | 39084917 ~ 39086012 (+) | True | G504886 |
| TU573259 | lncRNA | downstream | 58731 | 39093925 ~ 39094818 (+) | True | G504905 |
| TU573583 | lncRNA | downstream | 87165 | 39122359 ~ 39122579 (+) | True | G505180 |
| XM_021606418.2 | mRNA | upstream | 141431 | 38865594 ~ 38892231 (+) | False | zgc:162952 |
| XM_021606419.2 | mRNA | upstream | 141431 | 38865596 ~ 38892231 (+) | False | zgc:162952 |
| XM_021606415.2 | mRNA | upstream | 141431 | 38865599 ~ 38892231 (+) | True | zgc:162952 |
| XM_021606414.2 | mRNA | upstream | 172665 | 38858009 ~ 38860997 (+) | True | b3galt8 |
| XM_021606413.2 | mRNA | upstream | 176215 | 38809184 ~ 38857447 (+) | False | LOC110525909 |
| XM_036980078.1 | mRNA | downstream | 6964 | 39042158 ~ 39068390 (+) | False | hsd17b3 |
| XM_036980076.1 | mRNA | downstream | 6965 | 39042159 ~ 39068390 (+) | False | hsd17b3 |
| XM_036980079.1 | mRNA | downstream | 7017 | 39042211 ~ 39068390 (+) | False | hsd17b3 |
| XM_036980077.1 | mRNA | downstream | 7825 | 39043019 ~ 39068390 (+) | True | hsd17b3 |
| XM_036980081.1 | mRNA | downstream | 120282 | 39155476 ~ 39234874 (+) | False | ptch1 |
| TU567034 | other | upstream | 4881925 | 34151140 ~ 34151737 (+) | True | G499111 |
| TU565715 | other | upstream | 5568607 | 33461635 ~ 33465055 (+) | True | LOC110525816 |
| TU565692 | other | upstream | 5713314 | 33317637 ~ 33320348 (+) | True | c6h22orf39 |
| TU565528 | other | upstream | 5869401 | 33154691 ~ 33164261 (+) | True | LOC110525799 |
| TU565537 | other | upstream | 5883664 | 33146467 ~ 33149998 (+) | False | LOC110525799 |
| TU573608 | other | downstream | 234765 | 39269959 ~ 39311874 (+) | True | fancc |
| TU574234 | other | downstream | 638818 | 39674012 ~ 39678263 (+) | False | LOC110525927 |
| TU574235 | other | downstream | 638818 | 39674012 ~ 39678263 (+) | False | LOC110525927 |
| TU574236 | other | downstream | 638818 | 39674012 ~ 39680031 (+) | False | LOC110525927 |
| TU574237 | other | downstream | 638818 | 39674012 ~ 39680031 (+) | True | LOC110525927 |
