Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021606493.1 |
| length | 1203 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 3 |
| gene id | avp |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 40517591 ~ 40519539 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0005576 | extracellular region | cellular_component |
| GO:0005185 | neurohypophyseal hormone activity | molecular_function |
| id | description |
|---|---|
| K05242 | AVP; arginine vasopressin |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU574787 | lncRNA | upstream | 11507 | 40504114 ~ 40506084 (+) | False | LOC110525959 |
| TU574788 | lncRNA | upstream | 11507 | 40504114 ~ 40506084 (+) | True | LOC110525959 |
| TU574773 | lncRNA | upstream | 24359 | 40492027 ~ 40493232 (+) | True | G506247 |
| TU574774 | lncRNA | upstream | 25823 | 40491346 ~ 40491768 (+) | True | G506248 |
| TU574775 | lncRNA | upstream | 26673 | 40490578 ~ 40490918 (+) | True | G506249 |
| TU574808 | lncRNA | downstream | 12556 | 40532095 ~ 40532555 (+) | False | slc35d2 |
| TU574811 | lncRNA | downstream | 12556 | 40532095 ~ 40532632 (+) | True | slc35d2 |
| TU574814 | lncRNA | downstream | 20962 | 40540501 ~ 40540903 (+) | True | G506280 |
| TU574815 | lncRNA | downstream | 26774 | 40546313 ~ 40547513 (+) | True | G506281 |
| TU574876 | lncRNA | downstream | 118294 | 40637833 ~ 40639089 (+) | True | G506336 |
| XM_036980111.1 | mRNA | upstream | 11479 | 40500657 ~ 40506112 (+) | False | LOC110525959 |
| XM_036980112.1 | mRNA | upstream | 12093 | 40500657 ~ 40505498 (+) | False | LOC110525959 |
| XM_021606490.2 | mRNA | upstream | 27739 | 40476037 ~ 40489852 (+) | True | LOC110525957 |
| XR_002473848.2 | mRNA | upstream | 41683 | 40469471 ~ 40475908 (+) | True | LOC110525958 |
| XM_036980110.1 | mRNA | upstream | 65429 | 40449567 ~ 40452162 (+) | True | LOC110515135 |
| XM_021606494.2 | mRNA | downstream | 1435 | 40520974 ~ 40524282 (+) | True | ccl27a |
| XM_036980113.1 | mRNA | downstream | 8299 | 40527838 ~ 40533844 (+) | False | slc35d2 |
| XM_021606496.2 | mRNA | downstream | 8778 | 40528317 ~ 40533844 (+) | False | slc35d2 |
| XM_036980121.1 | mRNA | downstream | 49098 | 40568637 ~ 40886427 (+) | False | fbxl17 |
| XM_036980122.1 | mRNA | downstream | 49099 | 40568638 ~ 40671271 (+) | False | fbxl17 |
| TU574667 | other | upstream | 258541 | 40257067 ~ 40259050 (+) | True | LOC110525949 |
| TU574576 | other | upstream | 313705 | 40196800 ~ 40203886 (+) | True | G506095 |
| TU574449 | other | upstream | 554493 | 39962652 ~ 39963098 (+) | True | G505988 |
| TU574282 | other | upstream | 769111 | 39734784 ~ 39748480 (+) | True | LOC110525928 |
| TU574237 | other | upstream | 837560 | 39674012 ~ 39680031 (+) | True | LOC110525927 |
| TU574816 | other | downstream | 25324 | 40544863 ~ 40547513 (+) | False | G506281 |
| TU574820 | other | downstream | 46528 | 40566067 ~ 40566429 (+) | True | G506285 |
| TU574791 | other | downstream | 49187 | 40568726 ~ 40859522 (+) | True | fbxl17 |
| TU576412 | other | downstream | 950012 | 41469551 ~ 41471408 (+) | True | G507768 |
| TU577295 | other | downstream | 1609686 | 42129225 ~ 42131940 (+) | True | G508559 |
