Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_036980339.1 |
| length | 3356 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 11 |
| gene id | LOC110526068 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 49195188 ~ 49220181 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU585596 | lncRNA | downstream | 7864 | 49185679 ~ 49187324 (-) | False | G516257 |
| TU585594 | lncRNA | downstream | 7864 | 49186303 ~ 49187324 (-) | True | G516257 |
| TU585597 | lncRNA | downstream | 10795 | 49183879 ~ 49184393 (-) | False | G516257 |
| TU585631 | lncRNA | downstream | 19871 | 49175051 ~ 49175317 (-) | True | G516275 |
| TU585516 | lncRNA | downstream | 131928 | 49045784 ~ 49063260 (-) | True | G516183 |
| TU585650 | lncRNA | upstream | 2206 | 49222387 ~ 49222646 (-) | True | G516293 |
| TU585655 | lncRNA | upstream | 7883 | 49228064 ~ 49229080 (-) | False | G516298 |
| TU585656 | lncRNA | upstream | 7975 | 49228156 ~ 49229080 (-) | False | G516298 |
| TU585658 | lncRNA | upstream | 7975 | 49228156 ~ 49228954 (-) | True | G516298 |
| TU585659 | lncRNA | upstream | 12341 | 49232522 ~ 49233050 (-) | True | G516299 |
| XM_036980340.1 | mRNA | downstream | 250312 | 48899344 ~ 48944876 (-) | False | surf4l |
| XM_021606676.2 | mRNA | downstream | 270801 | 48909133 ~ 48924387 (-) | False | surf4l |
| XM_021606675.2 | mRNA | downstream | 270815 | 48899344 ~ 48924373 (-) | False | surf4l |
| XM_036980341.1 | mRNA | downstream | 284008 | 48899344 ~ 48911180 (-) | False | surf4l |
| XM_036980331.1 | mRNA | downstream | 444816 | 48672475 ~ 48750372 (-) | True | LOC110526076 |
| XM_021606665.2 | mRNA | upstream | 13403 | 49233584 ~ 49240694 (-) | True | serpind1 |
| XM_036980346.1 | mRNA | upstream | 94044 | 49314225 ~ 49316393 (-) | True | LOC118964899 |
| XM_036980361.1 | mRNA | upstream | 96098 | 49316279 ~ 49320358 (-) | False | LOC110512258 |
| XM_036980362.1 | mRNA | upstream | 96098 | 49316279 ~ 49320358 (-) | False | LOC110512258 |
| XM_021592749.2 | mRNA | upstream | 126677 | 49346858 ~ 49349193 (-) | False | LOC110512256 |
| TU584888 | other | downstream | 564883 | 48627038 ~ 48630305 (-) | True | prdm12b |
| TU584725 | other | downstream | 814882 | 48375946 ~ 48380306 (-) | True | LOC118964892 |
| TU584351 | other | downstream | 874600 | 48319747 ~ 48320588 (-) | True | G515139 |
| TU584348 | other | downstream | 876781 | 48317648 ~ 48318407 (-) | True | LOC110512142 |
| TU584341 | other | downstream | 901734 | 48292846 ~ 48293454 (-) | False | LOC110512142 |
| TU585703 | other | upstream | 96863 | 49317044 ~ 49320412 (-) | True | LOC110512258 |
| TU585712 | other | upstream | 127289 | 49347470 ~ 49349136 (-) | True | LOC110512256 |
| TU585706 | other | upstream | 159641 | 49379822 ~ 49380822 (-) | True | LOC118936342 |
| TU585690 | other | upstream | 315034 | 49535215 ~ 49536285 (-) | True | G516320 |
| TU585710 | other | upstream | 402868 | 49623049 ~ 49623743 (-) | True | LOC110515945 |
