Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021607002.2 |
| length | 1114 |
| RNA type | mRNA |
| GC content | 0.52 |
| exon number | 10 |
| gene id | LOC110526218 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 57744132 ~ 57760940 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0006508 | proteolysis | biological_process |
| GO:0004222 | metalloendopeptidase activity | molecular_function |
| GO:0008270 | zinc ion binding | molecular_function |
| id | description |
|---|---|
| K08076 | E3.4.24.21; astacin |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU596002 | lncRNA | upstream | 45368 | 57698450 ~ 57698764 (+) | True | G525908 |
| TU595999 | lncRNA | upstream | 48644 | 57695268 ~ 57695488 (+) | True | G525905 |
| TU595997 | lncRNA | upstream | 49292 | 57694632 ~ 57694840 (+) | True | G525903 |
| TU595991 | lncRNA | upstream | 61936 | 57681988 ~ 57682196 (+) | True | G525897 |
| TU595731 | lncRNA | upstream | 149463 | 57594401 ~ 57594669 (+) | True | G525655 |
| TU596073 | lncRNA | downstream | 49800 | 57810740 ~ 57810945 (+) | True | G525969 |
| TU596513 | lncRNA | downstream | 69601 | 57830541 ~ 57830787 (+) | True | G526375 |
| TU596524 | lncRNA | downstream | 79571 | 57840511 ~ 57840853 (+) | True | G526386 |
| TU596533 | lncRNA | downstream | 90053 | 57850993 ~ 57851197 (+) | True | G526395 |
| TU596550 | lncRNA | downstream | 108560 | 57869500 ~ 57869702 (+) | True | G526411 |
| XM_021607003.2 | mRNA | upstream | 9197 | 57729444 ~ 57734935 (+) | True | LOC110526219 |
| XM_021607001.2 | mRNA | upstream | 27854 | 57713161 ~ 57716278 (+) | True | LOC110526217 |
| XM_021606998.2 | mRNA | upstream | 84203 | 57649932 ~ 57659929 (+) | False | psmc3 |
| XM_021606999.2 | mRNA | upstream | 84203 | 57649943 ~ 57659929 (+) | True | psmc3 |
| XM_021604991.2 | mRNA | upstream | 97079 | 57644667 ~ 57647053 (+) | True | aplnr2 |
| XM_036980581.1 | mRNA | downstream | 82054 | 57842994 ~ 57863756 (+) | False | LOC110526223 |
| XM_036980583.1 | mRNA | downstream | 82054 | 57842994 ~ 57863756 (+) | False | LOC110526223 |
| XM_036980582.1 | mRNA | downstream | 90787 | 57851727 ~ 57863756 (+) | False | LOC110526223 |
| XM_021607009.2 | mRNA | downstream | 90819 | 57851759 ~ 57863756 (+) | True | LOC110526223 |
| XM_036980584.1 | mRNA | downstream | 155405 | 57916345 ~ 57921070 (+) | True | fgf3 |
| TU596007 | other | upstream | 33792 | 57703458 ~ 57710340 (+) | True | G525912 |
| TU595717 | other | upstream | 101650 | 57639474 ~ 57642482 (+) | True | LOC110526214 |
| TU595733 | other | upstream | 116513 | 57621848 ~ 57627619 (+) | True | fbxo3 |
| TU595951 | other | upstream | 137765 | 57604108 ~ 57606367 (+) | True | G525861 |
| TU595721 | other | upstream | 163062 | 57576084 ~ 57581070 (+) | True | G525645 |
| TU596076 | other | downstream | 56884 | 57817824 ~ 57818280 (+) | True | G525972 |
| TU596687 | other | downstream | 349966 | 58110906 ~ 58112819 (+) | True | G526547 |
| TU596784 | other | downstream | 511139 | 58272079 ~ 58272836 (+) | True | G526628 |
| TU596824 | other | downstream | 557980 | 58318920 ~ 58371968 (+) | True | LOC110526933 |
| TU597653 | other | downstream | 1017783 | 58778723 ~ 58779017 (+) | True | G527450 |
