Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_036980584.1 |
| length | 2542 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 3 |
| gene id | fgf3 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 57916345 ~ 57921070 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0021571 | rhombomere 5 development | biological_process |
| GO:0021572 | rhombomere 6 development | biological_process |
| GO:0030177 | positive regulation of Wnt signaling pathway | biological_process |
| GO:0009880 | embryonic pattern specification | biological_process |
| GO:0043049 | otic placode formation | biological_process |
| GO:0051216 | cartilage development | biological_process |
| GO:0043066 | negative regulation of apoptotic process | biological_process |
| GO:0051781 | positive regulation of cell division | biological_process |
| GO:0048840 | otolith development | biological_process |
| GO:0008543 | fibroblast growth factor receptor signaling pathway | biological_process |
| GO:0009952 | anterior/posterior pattern specification | biological_process |
| GO:0009953 | dorsal/ventral pattern formation | biological_process |
| GO:0050769 | positive regulation of neurogenesis | biological_process |
| GO:0021703 | locus ceruleus development | biological_process |
| GO:0048920 | posterior lateral line neuromast primordium migration | biological_process |
| GO:0048665 | neuron fate specification | biological_process |
| GO:0021984 | adenohypophysis development | biological_process |
| GO:0030878 | thyroid gland development | biological_process |
| GO:0045666 | positive regulation of neuron differentiation | biological_process |
| GO:0007422 | peripheral nervous system development | biological_process |
| GO:0030901 | midbrain development | biological_process |
| GO:0030335 | positive regulation of cell migration | biological_process |
| GO:0048709 | oligodendrocyte differentiation | biological_process |
| GO:0060059 | embryonic retina morphogenesis in camera-type eye | biological_process |
| GO:0005615 | extracellular space | cellular_component |
| GO:0005104 | fibroblast growth factor receptor binding | molecular_function |
| GO:0008083 | growth factor activity | molecular_function |
| id | description |
|---|---|
| K04358 | FGF; fibroblast growth factor |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU596557 | lncRNA | upstream | 41365 | 57874116 ~ 57874980 (+) | True | G526418 |
| TU596555 | lncRNA | upstream | 42977 | 57873168 ~ 57873368 (+) | True | G526416 |
| TU596554 | lncRNA | upstream | 43235 | 57872766 ~ 57873110 (+) | True | G526415 |
| TU596550 | lncRNA | upstream | 46643 | 57869500 ~ 57869702 (+) | True | G526411 |
| TU596533 | lncRNA | upstream | 65148 | 57850993 ~ 57851197 (+) | True | G526395 |
| TU596586 | lncRNA | downstream | 22745 | 57943815 ~ 57945202 (+) | True | G526447 |
| TU596601 | lncRNA | downstream | 30463 | 57951533 ~ 57951744 (+) | True | G526462 |
| TU596615 | lncRNA | downstream | 61173 | 57982243 ~ 57982469 (+) | True | G526476 |
| TU596630 | lncRNA | downstream | 85168 | 58006238 ~ 58006461 (+) | True | G526491 |
| TU596655 | lncRNA | downstream | 114225 | 58035295 ~ 58040467 (+) | True | G526515 |
| XM_036980581.1 | mRNA | upstream | 52589 | 57842994 ~ 57863756 (+) | False | LOC110526223 |
| XM_036980583.1 | mRNA | upstream | 52589 | 57842994 ~ 57863756 (+) | False | LOC110526223 |
| XM_036980582.1 | mRNA | upstream | 52589 | 57851727 ~ 57863756 (+) | False | LOC110526223 |
| XM_021607009.2 | mRNA | upstream | 52589 | 57851759 ~ 57863756 (+) | True | LOC110526223 |
| XM_021607002.2 | mRNA | upstream | 155405 | 57744132 ~ 57760940 (+) | True | LOC110526218 |
| XM_021607014.2 | mRNA | downstream | 7708 | 57928778 ~ 57936266 (+) | True | LOC110526226 |
| XM_021607011.2 | mRNA | downstream | 20170 | 57941240 ~ 57943684 (+) | True | fgf19 |
| XM_021607019.2 | mRNA | downstream | 230770 | 58151840 ~ 58158582 (+) | True | LOC110526232 |
| XM_036980591.1 | mRNA | downstream | 297819 | 58218889 ~ 58228939 (+) | False | LOC110526234 |
| XM_021607025.2 | mRNA | downstream | 298484 | 58219554 ~ 58228939 (+) | False | LOC110526234 |
| TU596076 | other | upstream | 98065 | 57817824 ~ 57818280 (+) | True | G525972 |
| TU596007 | other | upstream | 206005 | 57703458 ~ 57710340 (+) | True | G525912 |
| TU595717 | other | upstream | 273863 | 57639474 ~ 57642482 (+) | True | LOC110526214 |
| TU595733 | other | upstream | 288726 | 57621848 ~ 57627619 (+) | True | fbxo3 |
| TU595951 | other | upstream | 309978 | 57604108 ~ 57606367 (+) | True | G525861 |
| TU596687 | other | downstream | 189836 | 58110906 ~ 58112819 (+) | True | G526547 |
| TU596784 | other | downstream | 351009 | 58272079 ~ 58272836 (+) | True | G526628 |
| TU596824 | other | downstream | 397850 | 58318920 ~ 58371968 (+) | True | LOC110526933 |
| TU597653 | other | downstream | 857653 | 58778723 ~ 58779017 (+) | True | G527450 |
| TU598912 | other | downstream | 1850638 | 59771708 ~ 59772084 (+) | True | G528653 |
