Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU601987 |
| length | 878 |
| lncRNA type | sense_over |
| GC content | 0.48 |
| exon number | 3 |
| gene id | LOC110526303 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 62648128 ~ 62685350 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0008152 | metabolic process | biological_process |
| GO:0003824 | catalytic activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU602001 | lncRNA | upstream | 1850 | 62669741 ~ 62670041 (+) | True | G531596 |
| TU601993 | lncRNA | upstream | 13047 | 62658530 ~ 62658844 (+) | True | G531589 |
| TU601963 | lncRNA | upstream | 78104 | 62593573 ~ 62593787 (+) | True | G531563 |
| TU601952 | lncRNA | upstream | 96774 | 62574885 ~ 62575117 (+) | True | G531553 |
| TU601950 | lncRNA | upstream | 98800 | 62572872 ~ 62573091 (+) | True | G531551 |
| TU602694 | lncRNA | downstream | 801 | 62686151 ~ 62686431 (+) | True | G532210 |
| TU602706 | lncRNA | downstream | 18190 | 62703540 ~ 62703758 (+) | True | G532222 |
| TU602720 | lncRNA | downstream | 26890 | 62712240 ~ 62712624 (+) | True | G532233 |
| TU602721 | lncRNA | downstream | 27378 | 62712728 ~ 62712939 (+) | True | G532234 |
| TU602764 | lncRNA | downstream | 27782 | 62713132 ~ 62713348 (+) | True | G532263 |
| XR_005052419.1 | mRNA | upstream | 101924 | 62568049 ~ 62569967 (+) | True | LOC118965084 |
| XM_021607128.2 | mRNA | upstream | 180203 | 62490495 ~ 62491688 (+) | True | LOC110526300 |
| XM_021607127.2 | mRNA | upstream | 180205 | 62490082 ~ 62491686 (+) | False | LOC110526300 |
| XM_021607123.2 | mRNA | upstream | 207158 | 62460321 ~ 62464733 (+) | True | LOC110526297 |
| XM_021607120.2 | mRNA | upstream | 285559 | 62377872 ~ 62386332 (+) | True | LOC110526295 |
| XM_021607143.2 | mRNA | downstream | 38095 | 62723445 ~ 62742080 (+) | True | LOC110526307 |
| XM_036980646.1 | mRNA | downstream | 67356 | 62752706 ~ 62947192 (+) | False | LOC110526939 |
| XM_036980647.1 | mRNA | downstream | 67356 | 62752706 ~ 62947192 (+) | False | LOC110526939 |
| XM_036980648.1 | mRNA | downstream | 67356 | 62752706 ~ 62947192 (+) | False | LOC110526939 |
| XM_036980649.1 | mRNA | downstream | 67356 | 62752706 ~ 62947192 (+) | False | LOC110526939 |
| TU601786 | other | upstream | 519673 | 62149773 ~ 62152218 (+) | True | G531406 |
| TU601664 | other | upstream | 692364 | 61971736 ~ 61979527 (+) | True | LOC110526282 |
| TU598912 | other | upstream | 2899807 | 59771708 ~ 59772084 (+) | True | G528653 |
| TU597653 | other | upstream | 3892874 | 58778723 ~ 58779017 (+) | True | G527450 |
| TU596824 | other | upstream | 4299923 | 58318920 ~ 58371968 (+) | True | LOC110526933 |
| TU602760 | other | downstream | 135070 | 62820420 ~ 62822616 (+) | True | G532259 |
| TU602899 | other | downstream | 326908 | 63012258 ~ 63014986 (+) | False | LOC110526311 |
| TU602734 | other | downstream | 347581 | 63032931 ~ 63198734 (+) | False | G532237 |
| TU603025 | other | downstream | 623183 | 63308533 ~ 63343755 (+) | True | G532489 |
| TU603064 | other | downstream | 652886 | 63338236 ~ 63339498 (+) | False | LOC100750227 |
