Gene
RNA
| Item | Value |
|---|---|
| RNA id | LOC118965064 |
| length | 559 |
| RNA type | mRNA |
| GC content | 0.54 |
| exon number | 2 |
| gene id | LOC118965064 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 68060636 ~ 68063992 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0034220 | ion transmembrane transport | biological_process |
| GO:0006812 | cation transport | biological_process |
| GO:0016020 | membrane | cellular_component |
| GO:0008324 | cation transmembrane transporter activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU608810 | lncRNA | upstream | 77742 | 67981566 ~ 67982894 (+) | True | G537721 |
| TU608808 | lncRNA | upstream | 87857 | 67971325 ~ 67972779 (+) | False | G537720 |
| TU608809 | lncRNA | upstream | 87857 | 67971708 ~ 67972779 (+) | True | G537720 |
| TU608781 | lncRNA | upstream | 119120 | 67940555 ~ 67941516 (+) | True | G537699 |
| TU608736 | lncRNA | upstream | 159595 | 67899800 ~ 67901041 (+) | True | G537654 |
| TU608894 | lncRNA | downstream | 45007 | 68108999 ~ 68109551 (+) | True | G537802 |
| TU608836 | lncRNA | downstream | 53501 | 68117493 ~ 68117835 (+) | True | G537744 |
| TU608897 | lncRNA | downstream | 55834 | 68119826 ~ 68130306 (+) | True | trnar-acg-5 |
| TU608907 | lncRNA | downstream | 74258 | 68138250 ~ 68138963 (+) | True | G537815 |
| TU608914 | lncRNA | downstream | 80889 | 68144881 ~ 68157426 (+) | True | G537819 |
| XM_021607377.2 | mRNA | upstream | 87045 | 67959814 ~ 67973591 (+) | True | LOC110526412 |
| XM_036980794.1 | mRNA | upstream | 162857 | 67849274 ~ 67897779 (+) | False | LOC110526410 |
| XM_036980795.1 | mRNA | upstream | 162857 | 67849274 ~ 67897779 (+) | True | LOC110526410 |
| XM_036980771.1 | mRNA | upstream | 307239 | 67739974 ~ 67753397 (+) | False | LOC110526406 |
| trnar-acg-5 | mRNA | downstream | 55838 | 68119830 ~ 68119902 (+) | False | trnar-acg-5 |
| XM_021607382.2 | mRNA | downstream | 101057 | 68165049 ~ 68188551 (+) | True | aldh1a2 |
| XM_021607385.2 | mRNA | downstream | 345225 | 68409217 ~ 68433079 (+) | False | LOC110526420 |
| XM_021607387.2 | mRNA | downstream | 345225 | 68409217 ~ 68433079 (+) | False | LOC110526420 |
| XM_021607388.2 | mRNA | downstream | 345225 | 68409217 ~ 68433079 (+) | False | LOC110526420 |
| TU608686 | other | upstream | 293023 | 67766756 ~ 67767613 (+) | True | G537617 |
| TU608672 | other | upstream | 304018 | 67754556 ~ 67756618 (+) | True | G537606 |
| TU608066 | other | upstream | 950008 | 67109676 ~ 67110628 (+) | True | G537032 |
| TU608056 | other | upstream | 955728 | 67104411 ~ 67104908 (+) | True | G537029 |
| TU608055 | other | upstream | 955774 | 67104411 ~ 67104862 (+) | False | G537029 |
| TU609823 | other | downstream | 615385 | 68679377 ~ 68681652 (+) | True | LOC110526436 |
| TU609862 | other | downstream | 640406 | 68704398 ~ 68704696 (+) | True | G538561 |
| TU609930 | other | downstream | 747127 | 68811119 ~ 68811890 (+) | True | G538607 |
| TU610240 | other | downstream | 842053 | 68906045 ~ 68906847 (+) | True | G538859 |
| TU610258 | other | downstream | 932091 | 68996083 ~ 69002828 (+) | True | G538877 |
