Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021607510.2 |
| length | 1138 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 6 |
| gene id | LOC110526495 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 71681601 ~ 71690360 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0045087 | innate immune response | biological_process |
| GO:0006954 | inflammatory response | biological_process |
| GO:0016310 | phosphorylation | biological_process |
| GO:0005737 | cytoplasm | cellular_component |
| id | description |
|---|---|
| K05402 | TOLLIP; toll-interacting protein |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU613525 | lncRNA | upstream | 50722 | 71630488 ~ 71630879 (+) | True | G541821 |
| TU613504 | lncRNA | upstream | 65384 | 71615938 ~ 71616217 (+) | True | G541800 |
| TU613488 | lncRNA | upstream | 67905 | 71609347 ~ 71613696 (+) | False | G541794 |
| TU613489 | lncRNA | upstream | 68321 | 71611547 ~ 71613280 (+) | True | G541794 |
| TU613491 | lncRNA | upstream | 70879 | 71609347 ~ 71610722 (+) | False | G541794 |
| TU613596 | lncRNA | downstream | 423 | 71690783 ~ 71692049 (+) | True | G541892 |
| TU613598 | lncRNA | downstream | 1800 | 71692160 ~ 71692463 (+) | True | G541894 |
| TU613632 | lncRNA | downstream | 23540 | 71713900 ~ 71807250 (+) | True | G541904 |
| TU613641 | lncRNA | downstream | 44505 | 71734865 ~ 71943278 (+) | True | G541913 |
| TU613644 | lncRNA | downstream | 46924 | 71737284 ~ 71740884 (+) | True | G541914 |
| XM_021604952.2 | mRNA | upstream | 1060091 | 70615476 ~ 70621510 (+) | False | cmc2 |
| XM_021604956.2 | mRNA | upstream | 1060091 | 70615476 ~ 70621510 (+) | False | cmc2 |
| XM_021604954.2 | mRNA | upstream | 1060091 | 70615491 ~ 70621510 (+) | False | cmc2 |
| XM_021604957.2 | mRNA | upstream | 1060091 | 70615492 ~ 70621510 (+) | False | cmc2 |
| XM_021604958.2 | mRNA | upstream | 1060091 | 70616488 ~ 70621510 (+) | False | cmc2 |
| XR_005052233.1 | mRNA | downstream | 271564 | 71961924 ~ 71967802 (+) | False | LOC118964930 |
| XM_021607530.2 | mRNA | downstream | 320735 | 72011095 ~ 72021875 (+) | True | LOC110526507 |
| XM_021607535.2 | mRNA | downstream | 383790 | 72074150 ~ 72098245 (+) | True | LOC110526509 |
| XM_021607537.2 | mRNA | downstream | 427378 | 72117738 ~ 72135463 (+) | False | LOC110526510 |
| XM_021607536.2 | mRNA | downstream | 428146 | 72118506 ~ 72135463 (+) | False | LOC110526510 |
| TU611814 | other | upstream | 1060127 | 70615525 ~ 70621474 (+) | False | cmc2 |
| TU611817 | other | upstream | 1060127 | 70615525 ~ 70621474 (+) | False | cmc2 |
| TU611726 | other | upstream | 1127681 | 70551795 ~ 70553920 (+) | True | LOC110526485 |
| TU611739 | other | upstream | 1197233 | 70481950 ~ 70484368 (+) | True | G540179 |
| TU611507 | other | upstream | 1642094 | 70036194 ~ 70039507 (+) | True | LOC110525047 |
| TU613619 | other | downstream | 109680 | 71800040 ~ 71804462 (+) | True | G541903 |
| TU613820 | other | downstream | 411020 | 72101380 ~ 72102474 (+) | True | G542053 |
| TU613870 | other | downstream | 460660 | 72151020 ~ 72152394 (+) | True | G542100 |
| TU614654 | other | downstream | 975100 | 72665460 ~ 72666872 (+) | True | saa |
| TU614766 | other | downstream | 1075321 | 72765681 ~ 72766851 (+) | True | G542890 |
