Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021607572.2 |
| length | 549 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 5 |
| gene id | LOC110526528 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 72641751 ~ 72643688 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0006414 | translational elongation | biological_process |
| GO:0009790 | embryo development | biological_process |
| GO:0005840 | ribosome | cellular_component |
| GO:0003735 | structural constituent of ribosome | molecular_function |
| id | description |
|---|---|
| K02943 | RP-LP2, RPLP2; large subunit ribosomal protein LP2 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU614646 | lncRNA | upstream | 42353 | 72599155 ~ 72599398 (+) | True | G542781 |
| TU614601 | lncRNA | upstream | 45089 | 72596373 ~ 72596662 (+) | True | G542742 |
| TU614600 | lncRNA | upstream | 45770 | 72595744 ~ 72595981 (+) | True | G542741 |
| TU614033 | lncRNA | upstream | 186400 | 72448348 ~ 72455351 (+) | False | G542250 |
| TU614724 | lncRNA | downstream | 64562 | 72708250 ~ 72761891 (+) | True | LOC110526531 |
| TU614735 | lncRNA | downstream | 72614 | 72716302 ~ 72721047 (+) | False | G542860 |
| TU614736 | lncRNA | downstream | 75157 | 72718845 ~ 72721047 (+) | True | G542860 |
| TU614767 | lncRNA | downstream | 123223 | 72766911 ~ 72767323 (+) | True | G542891 |
| TU614770 | lncRNA | downstream | 135347 | 72779035 ~ 72780214 (+) | True | G542894 |
| XM_021607571.2 | mRNA | upstream | 3401 | 72632781 ~ 72638350 (+) | True | LOC110526527 |
| XM_021607563.2 | mRNA | upstream | 10370 | 72613695 ~ 72631381 (+) | False | LOC110526524 |
| XM_021607565.2 | mRNA | upstream | 10370 | 72616421 ~ 72631381 (+) | False | LOC110526524 |
| XM_021607566.2 | mRNA | upstream | 10370 | 72624178 ~ 72631381 (+) | False | LOC110526524 |
| XM_021607567.2 | mRNA | upstream | 10370 | 72627796 ~ 72631381 (+) | True | LOC110526524 |
| NM_001160521.1 | mRNA | downstream | 10747 | 72654435 ~ 72658903 (+) | True | frih |
| NM_001124436.1 | mRNA | downstream | 21853 | 72665541 ~ 72666710 (+) | False | saa |
| XM_036980910.1 | mRNA | downstream | 24177 | 72667865 ~ 72672678 (+) | False | LOC110518525 |
| XM_036980909.1 | mRNA | downstream | 25299 | 72668987 ~ 72672678 (+) | False | LOC110518525 |
| XM_036980908.1 | mRNA | downstream | 25300 | 72668988 ~ 72672677 (+) | False | LOC110518525 |
| TU613870 | other | upstream | 489357 | 72151020 ~ 72152394 (+) | True | G542100 |
| TU613820 | other | upstream | 539277 | 72101380 ~ 72102474 (+) | True | G542053 |
| TU613619 | other | upstream | 837289 | 71800040 ~ 71804462 (+) | True | G541903 |
| TU611814 | other | upstream | 2020277 | 70615525 ~ 70621474 (+) | False | cmc2 |
| TU614654 | other | downstream | 21772 | 72665460 ~ 72666872 (+) | True | saa |
| TU614766 | other | downstream | 121993 | 72765681 ~ 72766851 (+) | True | G542890 |
| TU614905 | other | downstream | 394933 | 73038621 ~ 73145347 (+) | True | LOC110526543 |
| TU615384 | other | downstream | 729117 | 73372805 ~ 73387687 (+) | False | LOC100136290 |
| TU616612 | other | downstream | 1644090 | 74287778 ~ 74288138 (+) | True | G544565 |
